| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_1548 |
|---|
| Symbol | |
|---|
| ID | 5380931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | + |
|---|
| Start bp | 1628458 |
|---|
| End bp | 1629348 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640834206 |
|---|
| Product | TRAP-type uncharacterized transport system periplasmic component-like protein |
|---|
| Protein accession | YP_001370093 |
|---|
| Protein GI | 153008878 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.127714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATCA AGAAGCTTTC CTTTGCTATC GCCGCCGTCC TTCTAAGCGC GGCAGGGGCA
CACGCTGAAC CGAAAGTCGT CAATCTCTGC ACCGGCACCG ATGGCGGTCC CTATGCCGTA
GCCGGAAAGA TGATTGCCGA TATGGCGAAG GGCGATCCCA ATGTCCGCGT TAACGTCATC
GTTGATACCG GCGGGACGTG GGCCAATATC CAAAAGACGG TTCTCGGCGA CGAATGCGAC
GCCATGATCG GCCAGCCGGA CGGTGCGGCA TATCTCAAGC GCCAGAACCC CGGCGCGGCT
GGTAGCCTCA AGCCAGTCGC CGACTTGCAC CGCGAATACC TCCATGCGCT TTGCTCGAAA
GATAGCGGCG TGTCCGATAT CGGCGACCTT GAAAGCGATC CAAAGGGCCA CGGCTATTCT
ATCGCTCTTG GCGATCAAGG TTCGGGCGCG TGGCTTATCT GGCAGAACTT CGTCGCCGAG
GATAGCGATT ACGGCGAAGT GCCAGTCAAG ACCGAAGGCG ACGTTATCGC GCTTGCTGCC
GTTGCTTCGA ACGAAACGAC TTGCGTTCTC CAACCGGCGG CAATCGGCAA TAGCCTTATT
CGGCAGGCCG ACGAACAATT CGGCGACGGC CTTACGCTTG TCGGTGTCAA CGACCGTGAT
TTCGATAACG CGACCGATCC GCAGGGCAAG CCGCTTTACA CCTACGCGAA AATCCCAAGC
GGCACCTATC CGAAGAGCCT GCAAGGCTGG TTTTCCGGCA AGTCAACGCT GACTTGGTTC
GCGAAAGTCT ACGTCAATAG CGACCGCTTC ACCGACAAGA AGAGCCTGTC GGCATTTATC
ACCGCCGTAT CGCGCGCCAA GCCCGCAATT CAAGCGCAGT ACGGAAAGTA G
|
|---|
| Protein sequence | MNIKKLSFAI AAVLLSAAGA HAEPKVVNLC TGTDGGPYAV AGKMIADMAK GDPNVRVNVI
VDTGGTWANI QKTVLGDECD AMIGQPDGAA YLKRQNPGAA GSLKPVADLH REYLHALCSK
DSGVSDIGDL ESDPKGHGYS IALGDQGSGA WLIWQNFVAE DSDYGEVPVK TEGDVIALAA
VASNETTCVL QPAAIGNSLI RQADEQFGDG LTLVGVNDRD FDNATDPQGK PLYTYAKIPS
GTYPKSLQGW FSGKSTLTWF AKVYVNSDRF TDKKSLSAFI TAVSRAKPAI QAQYGK
|
|---|
| |