Gene Oant_1316 details

Gene Information

• Locus tag: Oant_1316
• Symbol: upp
• ID: 5380012
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ochrobactrum anthropi ATCC 49188
• Kingdom: Bacteria
• Replicon accession: NC_009667
• Strand: -
• Start bp: 1391616
• End bp: 1392242
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 640833974
• Product: uracil phosphoribosyltransferase
• Protein accession: YP_001369862
• Protein GI: 153008647
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0035] Uracil phosphoribosyltransferase
• TIGRFAM ID: [TIGR01091] uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.58002
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCGTTA CAGTCGTCAG CCATCCGCTT GTCCAGCACA AGCTCACCAT CATGCGCAAG 
AAGGAAACGT CCACAGCCAG CTTTCGGCGG CTGCTGAAGG AAATATCGCT GTTGCTCTGC 
TATGAAGTGA CACGCGATCT CGAACTGACC ACGATGCCGA TCGAAACCCC GTTGATGCCA 
ATGGATGCGC CGGTCCTTGA AGGCAAGAAG CTTGTCTTCG CCTCGATCCT CCGCGCAGGC 
AATGGTCTTC TCGAAGGCAT GCTCGATCTG GTGCCCGCCG CGCGCGTCGC CCATATCGGC 
CTTTATCGTG ATCACGATAC GCTGCAGCCG GTCGAATATT ACTTCAAGGC GCCGGAAGAC 
ATCGTCAACC GCCTCATCAT CGTGGTCGAC CCGATGCTCG CCACCGGACA TTCGGCAATT 
GCAGCCATCG ACAAGCTGAA GGAACGCGGC GCGACCAATA TCCGCTTCCT CTGTCTGCTG 
GCTGCACCGG AAGGCATCAA GCGCTTTACC GAAGCCCACC CGGATGTCGA CGTGTTCACG 
GCCTCCATCG ACGAACGCCT CGACGAAAAG GGCTATATCG TTCCCGGTCT CGGCGATGCC 
GGCGACCGTA TGTACGGTAC GAAGTAA 

 

Protein sequence

MGVTVVSHPL VQHKLTIMRK KETSTASFRR LLKEISLLLC YEVTRDLELT TMPIETPLMP 
MDAPVLEGKK LVFASILRAG NGLLEGMLDL VPAARVAHIG LYRDHDTLQP VEYYFKAPED 
IVNRLIIVVD PMLATGHSAI AAIDKLKERG ATNIRFLCLL AAPEGIKRFT EAHPDVDVFT 
ASIDERLDEK GYIVPGLGDA GDRMYGTK