Gene Oant_0856 details

Gene Information

• Locus tag: Oant_0856
• Symbol: rho
• ID: 5379767
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ochrobactrum anthropi ATCC 49188
• Kingdom: Bacteria
• Replicon accession: NC_009667
• Strand: +
• Start bp: 886052
• End bp: 887317
• Gene Length: 1266 bp
• Protein Length: 421 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640833501
• Product: transcription termination factor Rho
• Protein accession: YP_001369407
• Protein GI: 153008192
• COG category: [K] Transcription
• COG ID: [COG1158] Transcription termination factor
• TIGRFAM ID: [TIGR00767] transcription termination factor Rho

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.447055
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGAAA TGAAACTACA AGAACTAAAG AACAAGACAC CGGTGGAGCT GCTGGCTTTT 
GCCGAAACAC TTGAGGTCGA AAACGCGAGC GCCATGCGCA AGCAGGAACT GATGTTCGCG 
ATCCTCAAGA AGCTGGCGGC CCAGGACGTC GAAATTATCG GCGAGGGCGT CGTTGAGGTG 
CTGCAGGATG GATTTGGCTT CCTGCGCTCT GCTGATGCCA ACTACCTGCC GGGCCCAGAC 
GATATTTATA TTTCACCCTC GCAGCTGCGT CGTTTTTCTC TCAAGACCGG TGATACGGTC 
GAAGGTCCGA TCCGCGGTCC CAAGGAAGGC GAACGTTATT TCGCGCTGCT CAAGGTTAAT 
TCGATCAATT TCGAAGATCC GGAAAAGATC CGGCACAAGG TTCATTTCGA CAATCTGACG 
CCGCTCTACC CGAATGAGCG CTTCAAGATG GAACTGGAAG TTCCAACTTC CAAGGATCTT 
TCGCCGCGTG TCATTGATCT GGTGGCACCG CTCGGCAAGG GCCAGCGCGG CCTGATCGTC 
GCTCCGCCGC GTACCGGTAA GACTGTTCTT CTCCAGAACA TCGCCCATTC GATCACCGCA 
AATCATCCGG AATGCTATCT GATCGTTCTT CTGATCGACG AACGTCCGGA AGAAGTGACC 
GACATGCAGC GCTCGGTGAA GGGCGAAGTG ATTTCCTCGA CCTTCGATGA ACCGGCAGCG 
CGTCACGTTC AGGTGGCTGA AATGGTCATC GAAAAGGCCA AGCGCCTTGT TGAACATGGT 
CGCGATGTTG TGATCCTGCT CGACTCGATC ACCCGTCTTG GTCGCGCTTA CAACACGGTT 
GTGCCGTCTT CCGGCAAGGT TCTGACCGGT GGTGTGGACG CCAATGCATT GCAGCGCCCG 
AAGCGCTTCT TCGGTGCCGC GCGCAATATC GAAGAAGGCG GTTCGCTGAC CATCATCGCA 
ACCGCGCTGA TCGATACGGG CAGCCGTATG GACGAAGTGA TCTTTGAAGA ATTCAAGGGC 
ACCGGTAACT CGGAAATCGT GCTTGACCGC AAGGTTGCCG ACAAGCGCAT CTTCCCGGCC 
ATGGACATTC TCAAGTCCGG CACCCGCAAG GAAGACCTGC TCGTACCGCG CGCCGATCTG 
CAGAAGATTT TCGTTCTGCG CCGTATCCTC GCGCCGATGG GCACGACCGA TGCGATCGAA 
TTCCTTATCG ATAAGCTCAA GCAGACCAAG AGCAATTCCG AATTCTTCGA TTCGATGAAT 
ACGTAA 

 

Protein sequence

MQEMKLQELK NKTPVELLAF AETLEVENAS AMRKQELMFA ILKKLAAQDV EIIGEGVVEV 
LQDGFGFLRS ADANYLPGPD DIYISPSQLR RFSLKTGDTV EGPIRGPKEG ERYFALLKVN 
SINFEDPEKI RHKVHFDNLT PLYPNERFKM ELEVPTSKDL SPRVIDLVAP LGKGQRGLIV 
APPRTGKTVL LQNIAHSITA NHPECYLIVL LIDERPEEVT DMQRSVKGEV ISSTFDEPAA 
RHVQVAEMVI EKAKRLVEHG RDVVILLDSI TRLGRAYNTV VPSSGKVLTG GVDANALQRP 
KRFFGAARNI EEGGSLTIIA TALIDTGSRM DEVIFEEFKG TGNSEIVLDR KVADKRIFPA 
MDILKSGTRK EDLLVPRADL QKIFVLRRIL APMGTTDAIE FLIDKLKQTK SNSEFFDSMN 
T