Gene OSTLU_92717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_92717 
Symbol 
ID5002051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009359 
Strand
Start bp163683 
End bp164840 
Gene Length1158 bp 
Protein Length385 aa 
Translation table 
GC content58% 
IMG OID640417472 
Productpredicted protein 
Protein accessionXP_001417937 
Protein GI145346936 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.670839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0275457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTTACG CACCACGATG CACGTGCGCG CTGCGCATCG CGTTCATAGG GGACACGGGC 
ATAGGCAACG ACAAGCCAGG CTCGGTTTGG ACAGACTACC TTGGAAATGT TCGCCGACCA
TCGTACAAAG TCGATGGCGT GGAGTGTCAA ACGTTTGATG GCAAATACTG CGGCGCGTAT
TCTCGCGCAA AGAACGTTTT CCGACTCGCC GCGGACGCCG GTGCGGACTT GATCGTGCAC
GCGGGCGATC TCGATTACGC GTCGTCTCCC ACGAGCTTCT TTCGCTTCCT CACGGAACAT
GTTTGGAGGC GGGGAATATC GTACATCGCG AGTAAAGGAA ATCACGACGT CGATGGATGG
GACGGTGTCA GTGATCTTTG GAGTGGACCA CGCGGCTACC AAAGTTTATT ACGGCGGCAA
CTTCCGACGT TGCGAGGTTC GACGTATTCG GGATCGTACG GCGAAGATTT CATCATGGAA
ACCCCTGATG TTTTGATCGT ACTGTCTTCC GTCGGCGCCG AACGACCTGG GGAGTCGGCC
AATCGCGACC ACTACGACTT TTTAGAGCGC GCGTTGAGTT CGTCGAAGAG AAAATGGAAA
ATTTGCGTGT GGCACATGAC GCAAGAGCGC TTGCAAGTCA GCTACAAAGG CGACGCGGTG
GGATTCGGGG CGTACGAAAT ATGTCGCAAA TACGGCGCGT TTATAGTCAC TGGACACGCA
CACGTGTACA GTCGTTCTTT CACCATGAAT CGCTTCGGCT CCAAGGTCTA CGATTTCACG
CGAGAAGATC TTCAAGTCTA CGACCGCGAG ACGCGTCGCG TCTTGCTTCG GCCGTCTCGA
GCCTCTTCAA ACGACGGTCT GACCGCCGTC GCCGTCGTCG GCATCGGCGG CTACAAAAAT
GAAGCTCAAC TCACCGACAG CGGCATCTGG GCCAAGGTAT ACTCCACCTC CTGTCTCGCG
TCTTCGCCGA CGTGCGTTCG AGCCCCCGAC GCGTCAAAGT TCGGCGCCTT GATTTGCGAC
TTTGACGACG CCTCCGATCG CGCGTCTTGC GCCCTTCGCG TCGTTCCATA CCAAGGCGCC
GACGACGCCG CGTTTCGCTA TCGCGCGCGC GCGCCCGACG CCGTCGTCGA CGCCTTCGAT
CTCGCGCGCG TCGCGTGA
 
Protein sequence
LLYAPRCTCA LRIAFIGDTG IGNDKPGSVW TDYLGNVRRP SYKVDGVECQ TFDGKYCGAY 
SRAKNVFRLA ADAGADLIVH AGDLDYASSP TSFFRFLTEH VWRRGISYIA SKGNHDVDGW
DGVSDLWSGP RGYQSLLRRQ LPTLRGSTYS GSYGEDFIME TPDVLIVLSS VGAERPGESA
NRDHYDFLER ALSSSKRKWK ICVWHMTQER LQVSYKGDAV GFGAYEICRK YGAFIVTGHA
HVYSRSFTMN RFGSKVYDFT REDLQVYDRE TRRVLLRPSR ASSNDGLTAV AVVGIGGYKN
EAQLTDSGIW AKVYSTSCLA SSPTCVRAPD ASKFGALICD FDDASDRASC ALRVVPYQGA
DDAAFRYRAR APDAVVDAFD LARVA