| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_92667 |
|---|
| Symbol | |
|---|
| ID | 5001560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009358 |
|---|
| Strand | + |
|---|
| Start bp | 840709 |
|---|
| End bp | 841563 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | |
|---|
| GC content | 64% |
|---|
| IMG OID | 640416981 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001417367 |
|---|
| Protein GI | 145345758 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0000121698 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGCG ACGACGCGAA GGCGGCGAAG AAGGCGAAGA AGGCGAAGAA GGAGAAGAAG
GAAAAGAAAT CCAAGCGCGC GCGCGAGGAC GAGGAGGCGC GCGCGACGGA GCGCGGTGAG
GAGAAGAAAC GCTCGAAACG CGACGCCGGC GGCGGCGGTG CGAACGAGGA AAAACCGACG
ACGACGGACG ACGAGGCGAC GGAACAGCGC GACGGGAAGA GCGATGCGGC GAAGAAAGAC
GCGCCGGCGC CGGGGACGTT TCCGACGTCG TCCACGCACG TGTACATGGG GAACCTGGCG
TGGACCATCG ACGAGGCGGC GCTCGGCGAG GCGTTCGCCG ACTGCGGAGA AATCGTGAGC
GTGAATTGGT TCGAAGAGAA AGCCACGGGG AAGTTTTTAG GGGCTGGAGT GGTTGAGTTT
AAAACCGCGG AGGCGGCGGC GGCGGCGGTG GCGGCGACGG GGCGGTTGGT GCATAAACGC
GAGACGCCGG TGCGATTTTG GGAAAAGCGC GGCAACACGG CGGAGGAGCG AGCGGCGGCC
AAGGCGGCGG GCGGGGGCGG GCGCGCGGAG ATCAAGCCCA TGGGGGAGAA GCCTGAGGGA
TGTTACACGC TGTTCATGGG GAATTTGAAC TTTCAGATCG ACGACGATAC GATTTATAAA
TTCTTCATGG ACGGCGCGGG CGTCGGTCCG CACACCATTC GTTGGCTCAC GAACAAAGAG
ACCGGGGAAT TCCGCGGCGT GGGATTCGCA GATTTCTCGG GCGCCGAGAT CGACGCGGCG
GCGAAGTTAC ACGGGGAGAA GTGCATGGGT CGGCCGATTC GTCTCGATTG GCAGGCGCCG
AGCAATCGCG GTTGA
|
|---|
| Protein sequence | MASDDAKAAK KAKKAKKEKK EKKSKRARED EEARATERGE EKKRSKRDAG GGGANEEKPT
TTDDEATEQR DGKSDAAKKD APAPGTFPTS STHVYMGNLA WTIDEAALGE AFADCGEIVS
VNWFEEKATG KFLGAGVVEF KTAEAAAAAV AATGRLVHKR ETPVRFWEKR GNTAEERAAA
KAAGGGGRAE IKPMGEKPEG CYTLFMGNLN FQIDDDTIYK FFMDGAGVGP HTIRWLTNKE
TGEFRGVGFA DFSGAEIDAA AKLHGEKCMG RPIRLDWQAP SNRG
|
|---|
| |