Gene OSTLU_89884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_89884 
Symbol 
ID5006912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009375 
Strand
Start bp266571 
End bp266999 
Gene Length429 bp 
Protein Length142 aa 
Translation table 
GC content55% 
IMG OID640422333 
Productpredicted protein 
Protein accessionXP_001422854 
Protein GI145357293 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00523] eukaryotic/archaeal initiation factor 1A 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value0.248522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00319635 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGAAGA GTAACTCCAA GGGAAAGGGA GGGAAGAACC GTCGTCGCGG GAAAGGGGGC 
GGCGAAGACG AGAAGCGCGA ACTCATCTTC AAAGAGGACG GTCAAGAGTA CGCGCAAGTG
TTGCGCATGC TCGGGAACGG GCGCTTAGAG GCGCAGTGCA TCGATGGGGT GAAGCGTTTG
TGTCACATTC GCGGTAAAAT GCGGAAAAAG GTTTGGGTGA ACACCGGGGA CATCATCCTG
TTGGGCTTGC GGGACTTTCA AGACGAAAAG GCGGACGTCA TCTTGAAGTA CTTGGCCGAC
GAGGCGCGCT CGTTGAAGGC GTACGGGGAA CTCCCGGACA CTTTCCGCGT GAACGATACG
GATACGTTCG AAGAAGAGCG CGACGAGAAC GATGACTTCT TCGATTTCGA CGACATTAAT
GACATTTAA
 
Protein sequence
MPKSNSKGKG GKNRRRGKGG GEDEKRELIF KEDGQEYAQV LRMLGNGRLE AQCIDGVKRL 
CHIRGKMRKK VWVNTGDIIL LGLRDFQDEK ADVILKYLAD EARSLKAYGE LPDTFRVNDT
DTFEEERDEN DDFFDFDDIN DI