Gene OSTLU_89084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_89084 
Symbol 
ID5005405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009368 
Strand
Start bp152030 
End bp152800 
Gene Length771 bp 
Protein Length256 aa 
Translation table 
GC content69% 
IMG OID640420826 
Productpredicted protein 
Protein accessionXP_001421401 
Protein GI145354245 
COG category[S] Function unknown 
COG ID[COG4270] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0362829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00339448 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGTCCGA GCGTCGCCGT CGTCGCGCGC GCCGCCGCGT TCGCCCGCGT CGCGCGTCCG 
CGCGCGTCGC GCGCGCGTCG GCCCGCGTCG TCGACGCGTC GTCCGCGAGC GACGCGAGTT
TCTGCGTCCC CAGAGCTCGA GCCTCGGGAC GTCGCGCCCT GGACGGCGCC CGGCTATCGC
GGCGCGCGCG TCTCCGCGCT CGACGAGCGC GCGCAGACCG CGTGCGTGCT CGCGGTGTGG
GCCGCGATCC TTCTCGGCAC GTACGAGTGC TGCGAGGTCG TCGGCCCGGC GACGCGAGCG
CTCGCGCCGG AGCTCGCGGC TTGGTCGGCG AGAAGTTGGC CGCTCATCGG ACTCACGTAC
ATCGCCGCGG GCGCGGCACA TTTCGCCGTG CACGATGGGT TCACGTCCAT GATGCCGCAC
AAAGGCGCGT GGGGATTCTG GAACTTACCG GGAAGCGCGA GTTTTCACGT CAACTGGACG
GGCGTCGCGG AAATTTTGGG CGGCTTCGGC GTCGTCCTCG GCTCGCTCCC GTTCGGTCTC
ACGCCCGATT TTTGCGAATC CTGGCTGACG CCCGCGAGCG CGGCGGGGTT GTTTCTGTTG
ACCATCGTCG TCACGCCCGC GAACACGTAC ATGTGGACTC ACAATTCGCC CGGTCCGCTG
CCGCCGAACG CCGACGAGTC CATGCAAGTC TTGCCGTGGC AGGGCCATCT CGCGCGCGCG
GCGTTACAGA TATTTCTGTT AACCATGCTC CACGGTTTGA TCGTTCGCTA G
 
Protein sequence
MRPSVAVVAR AAAFARVARP RASRARRPAS STRRPRATRV SASPELEPRD VAPWTAPGYR 
GARVSALDER AQTACVLAVW AAILLGTYEC CEVVGPATRA LAPELAAWSA RSWPLIGLTY
IAAGAAHFAV HDGFTSMMPH KGAWGFWNLP GSASFHVNWT GVAEILGGFG VVLGSLPFGL
TPDFCESWLT PASAAGLFLL TIVVTPANTY MWTHNSPGPL PPNADESMQV LPWQGHLARA
ALQIFLLTML HGLIVR