Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_89084 |
Symbol | |
ID | 5005405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009368 |
Strand | - |
Start bp | 152030 |
End bp | 152800 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | |
GC content | 69% |
IMG OID | 640420826 |
Product | predicted protein |
Protein accession | XP_001421401 |
Protein GI | 145354245 |
COG category | [S] Function unknown |
COG ID | [COG4270] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0362829 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00339448 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGTCCGA GCGTCGCCGT CGTCGCGCGC GCCGCCGCGT TCGCCCGCGT CGCGCGTCCG CGCGCGTCGC GCGCGCGTCG GCCCGCGTCG TCGACGCGTC GTCCGCGAGC GACGCGAGTT TCTGCGTCCC CAGAGCTCGA GCCTCGGGAC GTCGCGCCCT GGACGGCGCC CGGCTATCGC GGCGCGCGCG TCTCCGCGCT CGACGAGCGC GCGCAGACCG CGTGCGTGCT CGCGGTGTGG GCCGCGATCC TTCTCGGCAC GTACGAGTGC TGCGAGGTCG TCGGCCCGGC GACGCGAGCG CTCGCGCCGG AGCTCGCGGC TTGGTCGGCG AGAAGTTGGC CGCTCATCGG ACTCACGTAC ATCGCCGCGG GCGCGGCACA TTTCGCCGTG CACGATGGGT TCACGTCCAT GATGCCGCAC AAAGGCGCGT GGGGATTCTG GAACTTACCG GGAAGCGCGA GTTTTCACGT CAACTGGACG GGCGTCGCGG AAATTTTGGG CGGCTTCGGC GTCGTCCTCG GCTCGCTCCC GTTCGGTCTC ACGCCCGATT TTTGCGAATC CTGGCTGACG CCCGCGAGCG CGGCGGGGTT GTTTCTGTTG ACCATCGTCG TCACGCCCGC GAACACGTAC ATGTGGACTC ACAATTCGCC CGGTCCGCTG CCGCCGAACG CCGACGAGTC CATGCAAGTC TTGCCGTGGC AGGGCCATCT CGCGCGCGCG GCGTTACAGA TATTTCTGTT AACCATGCTC CACGGTTTGA TCGTTCGCTA G
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Protein sequence | MRPSVAVVAR AAAFARVARP RASRARRPAS STRRPRATRV SASPELEPRD VAPWTAPGYR GARVSALDER AQTACVLAVW AAILLGTYEC CEVVGPATRA LAPELAAWSA RSWPLIGLTY IAAGAAHFAV HDGFTSMMPH KGAWGFWNLP GSASFHVNWT GVAEILGGFG VVLGSLPFGL TPDFCESWLT PASAAGLFLL TIVVTPANTY MWTHNSPGPL PPNADESMQV LPWQGHLARA ALQIFLLTML HGLIVR
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