Gene OSTLU_88181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_88181 
Symbol 
ID5003670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009363 
Strand
Start bp188869 
End bp190725 
Gene Length1857 bp 
Protein Length618 aa 
Translation table 
GC content56% 
IMG OID640419091 
Productpredicted protein 
Protein accessionXP_001419518 
Protein GI145350233 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.642963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAT CACCACGCGA GAAGATCAAG CGCCTCGCCG TGGCATGCGT GCGACGCGGC 
TCGTTCATCT CGCTCTGTCT CTACGTCCTC GGCCTCGTCG TCGCCTCGCT CGCGCCGTCG
CTCGCGAGAG ACGTCTACGT GGATGAGAAT GCATTCCTCG TAGGCTCCAC GCACGCGACG
TTTGACGACC TCGACGGCGC GCGCGCGGAT GATTACGTCG AGACATTGAC TAAAATCACG
TTCGACGCCC GATCGCGGGC GCGAACGACG CGTGAGCGCT TGGAATGGGT TTTAAACGCC
CTCGATGAGC GCGGCTTTGA GAGTTACAAA TCATGGCTCG ACGGCGCTGG TGACTTGTTC
AACGTCCACG GCGTCGCTCG CGCGGCGCGA GGGAACGGAC GAGAATCGAT GGCGTTGGTC
ACGGTCCTGG GTGACGGTGA CGCTGACGCT GAGGCGGCGA CGGTCGGATT GGCGTTGCGC
GCGTTTGAGA AGATTGGTCG CGCTCCGTGG TTGGCGAAGG ATTTAATGTG GGTCTGCGTC
GATGGCTCGC GAGGAGAGAT CGATGGGACG ATGGCTTGGT TAAAGACGTA TTATTCATCT
AGCGTTGGGG ACTTGGGTGG GGGATTTGAG CGCGCGGGGG CGATACAGCA GGCGTTTGTG
TTTCGCGCGG CGAACCGTGG CGCCGCGGCG TCGGCGGTGC GCGTCAAGTT GGAGGGTTGG
AATGGGGCAT ATCCGAATCA AGACATATTT ACGATGTTTC GTAGCATCGT GGAGACGTAC
CCTGTGAGCA TGAGAGTAAG CTTGGAGTCG GATGTCGAGG TGCGAGAAGA TGATCTTTCG
CGCTGGAGTT TGATGAAATC GACGGCGCGC TTCATGTGGC GCGCCGCCAC GGGAATTCCT
TCGGGTGCGC ACGCCGCGTT CAAGGCGCAC TCAATCGATG CGATTAGTTT CGAAGCGATC
GAACGTCAAC AAGACGCTTA CGTGCGAAGC GGTTTGCGAG CGTACGTCAC TTTGGGACAG
ATGCTTGAAC TTACGTTTCG AGCGTGCAAC AACTTGCTCG AGCTCTTGCA TCACAGTTGC
TTTTATTATA TCTTGCTCGG TCCAAACAAG TTTCTTGGCA TAGCAGAGTA CATCGCGCCG
CAAGCAATTC TTCTCGTCAG TCTTTTACTC ACCGCGTTGA AAATGACGAC GTTCGGGATG
GAAGATACGT CGTCAACAAG CGATGGCGAA ACGCGAATGT CACATGATTG GTTTGCGGCA
ATATCGAAAC TTTCCTTGGC ACTCGTGTTC GGTGCCATCG TAGGTACGAG TTGCGTTTCA
TTGCATTTGA GGGAGCTAAA TCACGTGACG GTGACTTTGG GTACAGTCGC CGTCGCATTC
ATCGCTTTCA TTACCTTTTT ACGCTTGACA CTCGACGGCG AGGCGTCTCC GGTTCGCTCG
ACGACAAAGG TTTGCGACGT TACCATCGTC CGACAAGAGC AGTGGGTCGG TGTGAAAGTG
ATCAACATCG CGTGGTTGCT ATTTACGATG AGTGCGTGTA CGTTTTTCAA CTTCGCTCTC
GCGTTTTTAA CCACCGTGGC GTTAGCGCCC GCGTGCTTGC TCTGCGCGCC GAGCGGCGAC
GCCGCGAAAC GAAACCGCGC AGTTGCGGTT CTCGGCGCGC TTCCGCCGAC ATGGATGTTC
GTTCTCAGCC GTTTTGCTGG ATCACCGGTG TACGAGTCTT TCGGTCTGCT CGCCGAACAC
CACGTACGTT GGAAAACGTT CGCGTTGCCA GTCGTCTTTG GCATCGCGTT CCCGGTGCTG
TTAATTTGTT TTGATGTTGC GCGTTCTCCA GTGAAATCGA AAACAAAAAA GGCTTAG
 
Protein sequence
MSASPREKIK RLAVACVRRG SFISLCLYVL GLVVASLAPS LARDVYVDEN AFLVGSTHAT 
FDDLDGARAD DYVETLTKIT FDARSRARTT RERLEWVLNA LDERGFESYK SWLDGAGDLF
NVHGVARAAR GNGRESMALV TVLGDGDADA EAATVGLALR AFEKIGRAPW LAKDLMWVCV
DGSRGEIDGT MAWLKTYYSS SVGDLGGGFE RAGAIQQAFV FRAANRGAAA SAVRVKLEGW
NGAYPNQDIF TMFRSIVETY PVSMRVSLES DVEVREDDLS RWSLMKSTAR FMWRAATGIP
SGAHAAFKAH SIDAISFEAI ERQQDAYVRS GLRAYVTLGQ MLELTFRACN NLLELLHHSC
FYYILLGPNK FLGIAEYIAP QAILLVSLLL TALKMTTFGM EDTSSTSDGE TRMSHDWFAA
ISKLSLALVF GAIVGTSCVS LHLRELNHVT VTLGTVAVAF IAFITFLRLT LDGEASPVRS
TTKVCDVTIV RQEQWVGVKV INIAWLLFTM SACTFFNFAL AFLTTVALAP ACLLCAPSGD
AAKRNRAVAV LGALPPTWMF VLSRFAGSPV YESFGLLAEH HVRWKTFALP VVFGIAFPVL
LICFDVARSP VKSKTKKA