| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_6389 |
|---|
| Symbol | |
|---|
| ID | 5000329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009356 |
|---|
| Strand | + |
|---|
| Start bp | 810790 |
|---|
| End bp | 811428 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | 640415750 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001416258 |
|---|
| Protein GI | 145342762 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTGCTGCG TGGGGAAGAA TTACGTCGAG CACGTCGGTG AGGTGGACAC GCAGATGCCG
GGAATAAGTA AAACCGCGAT ACCGGAGCTG CCGATTATTT TTCCCAAGGC GTCGACGTCG
TTGTGTGGGT CGGGGACGTC GGTGGAGTTG CGCGAACGCG AGGACGTCGA TTACGAGGGC
GAGCTGACAG CCATCATAAA GCGCGAGTGC AAGGACATCT CGGACGACGC GAGCGATGTG
GATGTCATCA GCACCTACGT CGCCGGTTGG ACGATCGCCA ACGACGTGAC GGCGAGAGTA
CTGCAAAAGA GTCACCAGCA GTGGTATCTG GGCAAGAGCT GTGACGGATT TTGTCCTCTG
GGGCCGTGGA TCGTGGCCGG GCACGACGCT CTCCCATCCG CCGCATCATT GGTCACAAAA
GTTAACGGTG AGATCCGACA AAACTCCACC GTCGACAAGA TGATTTTCAG CACCGCGGAA
CTGATCAGAT GCGTGTCCAA ATATCAAACC TTGCGTGCCG GCGACGCGAT ATTAACGGGA
ACGCCGAGCG GCGTCGGCGC CGGTTTCAAT CCCAAGCGAT TCCTGCGCCC TGGCGACGTC
GTGGAGATTG AAATAGAAGG CATCGGCGCG CTCGTGAAC
|
|---|
| Protein sequence | VCCVGKNYVE HVGEVDTQMP GISKTAIPEL PIIFPKASTS LCGSGTSVEL REREDVDYEG
ELTAIIKREC KDISDDASDV DVISTYVAGW TIANDVTARV LQKSHQQWYL GKSCDGFCPL
GPWIVAGHDA LPSAASLVTK VNGEIRQNST VDKMIFSTAE LIRCVSKYQT LRAGDAILTG
TPSGVGAGFN PKRFLRPGDV VEIEIEGIGA LVN
|
|---|
| |