Gene OSTLU_5406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_5406 
Symbol 
ID5005334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009368 
Strand
Start bp420466 
End bp421341 
Gene Length876 bp 
Protein Length292 aa 
Translation table 
GC content63% 
IMG OID640420755 
Productpredicted protein 
Protein accessionXP_001421287 
Protein GI145354005 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG5225] Uncharacterized protein involved in ribosome biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GAGATCGATC TCGGGACGCT GCGCGTCGTC GACGCCGCGC CGCTCGATGT CACCGCCGCC 
GACTCGGGCG AGGCGGAGGC GCACGCGCGC GAGCGCGCGC GAGACGTCCT CCAGCGCCTG
GTCGCGGAGT TGTTCGCGCT GCCGAGCGAA ACGGACGCGC ACGGACGGTT CGCGCAGTTG
CCCGAACCGA CGACGACGTT CCCGAGGCTG CGCGCGTTGC CCCCGAGCGA GGCGCCGCTG
ACGAAGTGGG AAAAGTTCGC GAAGGAGAAG GGGATCAAGA AACGGAAGCG AAGCAAGGAG
GTGTTCGATG AGAAGACGGA TGAATGGAAA CGGCGGTATG GGTATCAACG CGCGAGGGAC
GGGAACGATG TCATCATCGC GCCGGGGAAG ATGACGGACG TGCCGGGGAA GACGGAGGAC
CCGTTTACGC GCGAGGAGCG AGAGAAACGG GAACGGACGT TGAAGAATCG AGAGAAACAA
GATAAGAATT TGATGAACGC GGTGGCGGAG AAGGGTGCGA AGGCGTTACC GCCGACGCTG
CGATTGGCGG TGACTGGTAA GAAGGACTCC GTGGGGAGCG GGAAGCTAGG GAAACGGGAG
ATGAAGGACG TGGCGGCGCG CGTCTCGCAC TCCACGGCGT CGGTCGGCAA ATTCAACGCC
CCAGTGCCGG GAGACGATAA GGTCAAGGTT CGCGGCAAGC GACGTCAGTT TGCGAGCGTG
ACGGATATGG ATTCTGAGCG TAAGAAGAGC TCGGAAATCA TCGATAAGTT GCTCGCGAAG
GAGAAGCGCG GCGGCGTCGT CGACGTCAAC GCGGCGGCGC GGAAGATTCA GCAAGAGAAG
GAAAAGGCGA ACCGCGTGAG CAAGCGCAAG AAGGCT
 
Protein sequence
EIDLGTLRVV DAAPLDVTAA DSGEAEAHAR ERARDVLQRL VAELFALPSE TDAHGRFAQL 
PEPTTTFPRL RALPPSEAPL TKWEKFAKEK GIKKRKRSKE VFDEKTDEWK RRYGYQRARD
GNDVIIAPGK MTDVPGKTED PFTREEREKR ERTLKNREKQ DKNLMNAVAE KGAKALPPTL
RLAVTGKKDS VGSGKLGKRE MKDVAARVSH STASVGKFNA PVPGDDKVKV RGKRRQFASV
TDMDSERKKS SEIIDKLLAK EKRGGVVDVN AAARKIQQEK EKANRVSKRK KA