| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_51391 |
|---|
| Symbol | |
|---|
| ID | 5005426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009368 |
|---|
| Strand | - |
|---|
| Start bp | 621526 |
|---|
| End bp | 624847 |
|---|
| Gene Length | 3322 bp |
|---|
| Protein Length | 645 aa |
|---|
| Translation table | |
|---|
| GC content | 60% |
|---|
| IMG OID | 640420847 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421518 |
|---|
| Protein GI | 145354493 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.644512 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGTC GCGGTCGCGA CGGCGATGCG TCGCCGGCGC GTCGGACGCG CGCGTGGACG
CTGGCGACGG CGATGAAGTT TACGGCGCTG CGACTGTTCG CGTCTGGGTT TCTGCTCGCG
CGCGTGGAAT CGCCGTCGAG GGCGACCGCG AGGCCGGACG CGGCGCGCGC GATCGTCGAT
AAGGCGGTGG TGCTCGTCGT CGACGGCGCG CGGCACGATT GGACGACGGC GACGAGGGAC
GAGGGCGACG AGGCGCGGCG GCGGTTGAAA CTGCCGAGCG CGAGACGATA CGGGGGGGGG
AGGCGGTGCG AAGACGCGAC GAACGAACGA GGACGAGGGA TGGTGTTTAA ATTCATAGCG
GACGCGCCGA CGACGACGCA GCAGCGGTTG AAGGGATTGC TCACGGGAGG GTTGCCGACG
TTTATCGACG CGAGCGCGTC GTTCGGCGGG ACGACGCTCG GGGAAGATAA TTTGATCGAA
CAGTTGAGCG CGAATGGACG ACGGATGGCG ATCAGTGGGG ACGATACGTG GAGCGAACTT
TTCGACGTGA ACGCGACGTT TCGGGCGGGG GCGGCGATGT ATCCGAGCTT TGACGTGAAG
GATACGGAGA CGGTGGACGC CGGCGTGCGC GCGTCGATGG CGGCCGCGTT GCGCGCGCCC
GATGACTGGG ACGTTTTGAT AGGGCACATG CTCGGTGCCG ATCACGTCGG CCACACGCAC
GGGGCGACGA CGGATTTCAT GCGCGCAAAG TTAGAGGAGA ATGATCGAGA TATCGAGAAC
GTAGTCGAGG CGATGCGAGC GGACGAAAAG TACGCCGACG CGATGGTGTT CGTGTTCGGC
GATCATGGGA TGACAGACAA CGGAGACCAC GGCGGTGGGA CGCCCGAGGA GGTGGAGTCT
TTCATGCTCG CGTATCACCC CTGGGCGAAA GGTGAGAACT GTGGGAACGG CGACGGCGAA
GACGACGATG ATTTCCCACA GATTGACTTC GCGCCGACGA TGGCGACGCT TCTGGGCGTG
CCCATACCGC ATGGAAATTT AGGAAAGGTG AACGAAAAAG TATTCAATCT CGCGCACGAG
GGGAAACGCG CGAGTGGGCG AGGCGATGTG TTCGCCGCTT ACGTGCGCGC GATGCACGCG
AACGCGGAGC AAATTTGGAC GTACGTTCAA TCGTACGGCG ACGGCAAGAC GAGTCCGTTT
GGTGCCGAAC ACACCACGCG CCTCGCGGCG CTCATGAAGG TGGTGCGAGC GAATAAATCT
GTAGACACGA CAGAGTTTGT GCTGGATTTC ATGAATGAGG TGGCAGAATT GGCGCGCGCG
AAGTGGGCAC AATTCGGATT GTTGAGCATG ACGGTTGGTT TCATCGCGCT CGTCGTCACG
CTCACGGCGC ACGCCGTGCT CGCGTACGAC AAAGTCGACG ACGCGCGCGA TGGAGATTTA
GATCTTATGA TCGCGCGCGT CGGTGTATTT ATGGTGATAT TAGCGTCCGT GGCACGATTA
TCGAATAGTT TCGTGGTGCA AGAGCGCGAG ATGATGCAAT TTCTCTTCGC CACGTTCATC
GTCGCCGCGA TGTTTGGGAG ATTCACACGA GGTCAAGCGG GGGTCTTGCA AAGTGGATGC
AAGTGCCTTT TTGCTAACGG TGCGCTTTAT GTTTTAGGAG TGTCGTGGGT GAAGAGTGAC
TCGACGGCGA TCGCGTCGCC CGCGATCACC GTCGTCATCG CAACGTGCGG GCTCGTCGTC
GTCATCGTCG CTTTGAACGC GATTCGTCGC CATGCGTCGA TGGCGTCGTA CAATGGTAAG
TTACGCGTCG TCGACATCGC ATCGTGCGCC TGGCTCACCG TGGCGATTCG GAGCGTGCAA
ATTTTAGTTT TCAAAGGCGA AGGAATCGCG CTCGCCCGTG CGACGTACGC GCTTTCAATC
GCAGGCGCTG TGGCGAACGG GATCGAGACG TCGACGCGGT CGCCGTCGGC GAACGTCGCA
CGTCTTCTGC GAGTTTTCAT ACTCTCAGTC GCACCGACGA TCGCCATGCT CGCCGGACCA
ATCCTAGGCG TCGCGTACGT AGCGCTGACA TACGTCTTGT ACGACGGTTT GCTCAGCCTC
TTGGTCGACG CGTCGCCGCG CTCGAAAGGC ACGGAAACTG TCGTCGCCAG TGGACTATGG
CTCGCGAGCA CGGTTGTATT TTTTGGTGGA GGACACACGT GCTCGTTTGA CGGTTTACAC
TTCGCCGTCG CGTTCACCGG CTTTCGCAAA TTCAACTTTT ACGGCATGGG ATTTCTCCTC
GGCTTTGAAA CGTGGAGTGG TGAAATCATT CTCGCCGTCG CCATTCCGCT CTTCGCGTTC
GCTATGACTC AAAATGAACC ATACGAGTCT TTCCAACGAT TGACCGTGCG CGTATCGATG
AAAGTCGCGC TCTTCCGCGC ATTCGCGGCG ACGTGCGCCG CCCTGTGCGC CTTCATCCAC
CGTCGACATT TGATGGTTTG GGCGATTTTT GCGCCAAAAT TCGTCTTCGA CGCCATCGGT
TCCACCGTCG CCGACGTTTG CGCCATCGTC GCCGTCGCTT CATCTTTCTC TAGGCATCCT
TTAGAGCGCG TCAAGCGCGA GTGATGCGAC GTTCGCTGTA TTATTATGTT CTCTCGCGAG
TCCCGACGCC CCGACGGCTG CCCAAAACCT CAACCTCATT TCGGGACACC GATTTTCGCG
ATGTTTAAAC CGATCACCCG CGAGCTCAAG CTCGCGCACG GCTCGCGACG CGAGCGTCGC
CGCGTCTCGC GCGCGACGGA ATCGCGCCTG CGCCCCGGGC GACAGGGCGT GCAACGAATC
TATCGCCTGA CCCAGGAAAA GGAAATGATT GGCGAGTACG AATACCTCGA GTCCATCGGC
GTCCCCAGGG CGCAGGCGCT GCAAGTCATG TCCCGAGCGT CCACAGCGTT CGAGCGCGAG
GCGGTGCGAC GAGGCCAAGA CCCGAAAGCG ATGAAATTCG GCGCGGAAGA GATGCGAGAG
GTGGTGGAGT TTCTGAAGGC GAGCGGCGTG AAGGAGGACG CGGTTGGATT TTTAGTCATA
CGTAATCCCG CGGTGTTGGC GTACGACGTG GAGAAACGAT TGAGACCGTT GTTTGAGTAC
ATGGAGGCGA CGTTCGAGCG GACGGCGGAG ATGTTTGTGG ATGACGTGAC GAAGCGGCCG
AGCTTGCTCG GGTTGGACGC CAACGAAAAC GCGAAAAAGA TGGTGGACTT TTTGTTATCC
ACGGGAAGCA CGAAGGAAGA GGCGGTGGAG TATTTATTGC GAACGCTTTA GGACTCGATG
TCGAGCGATT GATGATTAGC AG
|
|---|
| Protein sequence | MRRRGRDGDA SPARRTRAWT LATAMKFTAL RLFASGFLLA RVESPSRATA RPDAARAIVD
KAVVLVVDGA RHDWTTATRD EGDEARRRLK LPSARRYGGG RRCEDATNER GRGMVFKFIA
DAPTTTQQRL KGLLTGGLPT FIDASASFGG TTLGEDNLIE QLSANGRRMA ISGDDTWSEL
FDVNATFRAG AAMYPSFDVK DTETVDAGVR ASMAAALRAP DDWDVLIGHM LGADHVGHTH
GATTDFMRAK LEENDRDIEN VVEAMRADEK YADAMVFVFG DHGMTDNGDH GGGTPEEVES
FMLAYHPWAK GENCGNGDGE DDDDFPQIDF APTMATLLGV PIPHGNLGKV NEKVFNLAHE
GKRASGRGDV FAAYVRAMHA NAEQIWTYVQ SYGDGKTSPF GAEHTTRLAA LMKVVRANKS
VDTTEFVLDF MNEVAELARA KWAQFGLLSM TVGFIALVVT LTAHAVLAYD KVDDARDGDL
DLMIARVGTE TVVASGLWLA STVVFFGGGH TCSFDGLHFA VAFTGFRKFN FYGMGFLLGF
ETWSGEIILA VAIPLFAFAM TQNEPYESFQ RLTVRVSMKV ALFRAFAATC AALCAFIHRR
HLMVWAIFAP KFVFDAIGST VADVCAIVAV ASSFSRHPLE RVKRE
|
|---|
| |