| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_51201 |
|---|
| Symbol | |
|---|
| ID | 5005156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009367 |
|---|
| Strand | - |
|---|
| Start bp | 258262 |
|---|
| End bp | 259970 |
|---|
| Gene Length | 1709 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | |
|---|
| GC content | 59% |
|---|
| IMG OID | 640420577 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421099 |
|---|
| Protein GI | 145353608 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.037074 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGCGA GAGCGACGCC GGGAGCGATC AAACACGCGC GGAGCGCGCG CGCGGTGGCG
ACGCGGGCGA CGTACGGACG ACCCGAGCGC ATCGCGCGCG TGAAGGGAAA CGACGGGGGG
GCGTCGCGCG TGGGCGAGGC GTTGGAACTG CGAGGGTGGG CGCGATCGGT GCGGACGCAG
AAGGGAATGG CGTTCATCGA CCTGAACGAT GGGAGCGCGA TCTCGGGGAT GCAAGCGGTG
GTGAACGAGG GAAGCGCGGC GTGGGACGCG CTCGACGCGG GCGGCGTCTC CACGGGGGCG
GCGCTCAGGG TGAAGGGGAA ACTCGTGGCG AGTCCGGGAG GGAAGCAAGC GGCGGAATTG
GCGGTGGAGG AGATTGATGT CATCGGAACG GCGGATCCGG AGACGTATCC GCTGCAAAAG
AAGCGACACA CGCTGGAATA TCTTCGAAGC ATCGCGCACT TGCGACCTCG CACAAACACC
ATCGGCGCCG TGGCTCGCGT GCGCAATCAG TTGGCGTACG CGACGCACAC GTTCTTTCAA
GAGCATGGGT TTTTATACGC CAACACGCCG ATCATCACCG CGTCGGATTG CGAAGGCGCT
GGGGAACAGT TTCAAGTGAC GACGCTGTTG AACGGCTTCG GCGCCGGCGA GTGGACGACG
CCGGCCTCGG TCGTGGACGA GCAAGAAGCC ATGGTGAAGG CACAGGGTGA CGCGGTGAAG
GCCCTGAAGG AGGCGAAGAA AGCGGGAGAC GCGACGAAAG AGCAAGTTGA TGAGGCCGTG
GCGAAGCTTT TAGATCTCAA GGCGAGCGTC GAGGCGCTGA AGAACAATCG CCCGTCGTCC
GACTTGCCGA AGAATAAGGA TGGTTCCATC GACTATTCTC AAGACTTCTT CGGCAAACCG
TCTTATTTGA CCGTGTCTGG GCAATTGAAC GGTGAAATCA TGGCTTGCGC GGTCAACGAC
ATCTACACCT TCGGTCCGAC GTTCCGCGCG GAGAATAGCA ACACGTCGCG CCACCTGGCT
GAGTTTTGGA TGGTAGAGCC CGAACTCGCG TTCGCGGATT TGAACGACGA CATGGATTGC
GCAGAAGCGT ACTTGAAGTA TTGCCTGAAC CACGTCCTCG AGCACTGCGA CGAAGATCTT
GAATTCTTCG AGAAGAACAT CTCCAAAGAC AACCTGAGAG AGCGACTTCG AAACGTCGCG
TCGCAAGAGT TTGCGCGCAT CACGTACACC GAAGCCGTCG AGCACGTGTT GAACGCGAAG
AAGAAGTTTG AGTTCCCAAT CGAATGGGGA TCGGATCTTC AGAGCGAGCA CGAGCGGTAC
ATCTCAGAAG AAGTCTTCAA AGATCGCCCC GTGATCGTGC GCGATTATCC GAAAGATATC
AAGGCGTTCT ACATGCGTCT CAACGACGAC AACAAAACCG TCGCCGCAAT GGACGTCTTG
GTGCCCCGCG TTGGTGAGTT GATGGGTGGT AGCCAAAGAG AAGAACGCCT TGATGTCTTG
GAGCGCCGAA TCGAAGAGGT TGGTTTGGAA AAGGAGTCGT ACTGGTGGTA CTTAGATTTG
AGACGATACG GTTCGCAGCC GCACGCCGGT TTCGGCCTCG GTTTTGAACG CCTCGTTCAG
TACGTCACAG GTGTGGAGAA CATTCGTGAC GCCATTCCTT TCCCCCGTTA CCCGGGTAGC
GCTGAGTTCT AGATTTAGTC TAACGCGGC
|
|---|
| Protein sequence | MRARATPGAI KHARSARAVA TRATYGRPER IARVKGNDGG ASRVGEALEL RGWARSVRTQ
KGMAFIDLND GSAISGMQAV VNEGSAAWDA LDAGGVSTGA ALRVKGKLVA SPGGKQAAEL
AVEEIDVIGT ADPETYPLQK KRHTLEYLRS IAHLRPRTNT IGAVARVRNQ LAYATHTFFQ
EHGFLYANTP IITASDCEGA GEQFQVTTLV EALKNNRPSS DLPKNKDGSI DYSQDFFGKP
SYLTVSGQLN GEIMACAVND IYTFGPTFRA ENSNTSRHLA EFWMVEPELA FADLNDDMDC
AEAYLKYCLN HVLEHCDEDL EFFEKNISKD NLRERLRNVA SQEFARITYT EAVEHVLNAK
KKFEFPIEWG SDLQSEHERY ISEEVFKDRP VIVRDYPKDI KAFYMRLNDD NKTVAAMDVL
VPRVGELMGG SQREERLDVL ERRIEEVGLE KESYWWYLDL RRYGSQPHAG FGLGFERLVQ
YVTGVENIRD AIPFPRYPGS AEF
|
|---|
| |