| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_51113 |
|---|
| Symbol | |
|---|
| ID | 5004883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009366 |
|---|
| Strand | + |
|---|
| Start bp | 411129 |
|---|
| End bp | 412910 |
|---|
| Gene Length | 1782 bp |
|---|
| Protein Length | 593 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | 640420304 |
|---|
| Product | CPA2 family transporter: potassium ion efflux |
|---|
| Protein accession | XP_001420682 |
|---|
| Protein GI | 145352713 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
|---|
| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0882446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0997387 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGATT TACTTTGGCT CTTGTTCACG TCCGTGCTCG CGGTGACAAT CGTGAGCAAA
ATTCCGGGCG GTTCACCCGT GTTAGGGTTC CTCGTCGGTG GTGCCCTCGT CGGTCCGTTC
GGTCTCGGAA TCATCCAGCA CGTCGAACAA GTCAAGGTGC TCGCCGAATT CGGCGTCGTT
TTCCTTCTCT TCAACATCGG TCTCGAGCTT TCGTATGATC GTCTCGTGTC CATGGCCAAG
TATATTTTCG GACTTGGCTC GTCGCAGATG ATGCTGAGCA CCGCAGTTGG TGCCGCTGTC
GCCGTTGCGT GCGGGTTGGC CATACCTCCA GCGGTGATTG TTGGCTTGGG ACTCGCGTTT
TCTTCCACCG CCGTTGCGTT GCAAGTGCTC GCCGACAGAG GCGAGTCCGC GAGTCGCCAC
GGTCGCGCGA CGTTTTCCGT GTTGCTTTTT CAAGATTTAA CTGTTGTTTT GGTCTTCATG
CTCGTTCCGT TATTGGCTGG TCCCGATAGC GGGAGTCTTA CTGCCATCGG CGGCTCGTTA
CTCAAAGCCG TCGTAAAGAC GGCTGCCGCC ATCGTTTCCA TCATTGGTCT CGGTCGCGTG
GTTTTACGAC CAGTTTTCGA TCGCGTCGCA AAATTGCGCC AAGCCGAGCT CATGAGTGCG
ACGACGTTGT TTGTTGCGCT CGGCACGTCG CTCTTGACGC AGTCGCTAGG ATTATCCATG
GCGCTCGGCG CGTTTTTGGC TGGCTTACTT TTGGCGGAGA CGGAATTTCA TTTACAAGTC
GAAAACGATA TCGCGCCGTT CAGAGGGCTT CTGCTCGGTT TATTCTTCAT GACAGTCGGG
ATGACCATCG ACCCGATGAC GTTCACGCAG AGTGCGGGCA ACATAGTGAG CATGATGGCG
GCGATCTTAA TCGGCAAAAT CGCCGTCGTC GCCGCCGTCG GTCCCATGTT CGGGTTGTCG
CTCTTGAATT GTATTCGCGC CGGTATGTAC ATCGGTCCTG GCGGAGAGTT TGCCTTCGTG
ACTTTTGCCG AAGCGGTTCG TGTCGGTTTA TTCAGCCCTG ATCTCGCGAC GCAGCTCAAC
TTGGCTGTGG TGCTTACGAT GGCCATCACG CCCTACCTCG CCGAGGTCGG TAACAGCATG
AAGGACGTGT GGAAGAGTGG TAACGTCGCT ACGCTGCAAC CAAAGGAAAA CGAAGTGGAC
GACTTGAAAG GTCACGTCAT TTTGGCCGGG TACGGCCGTA ACGGCAAGAT TATCGGCGAG
ATTCTCAGTG CGAATATGAT TCCATTCGTA GCGTTGGACG TGAATCCAGA AATCGTCAGC
GAAGGTCGCG CCGCCGATCA AAACGTATAC TTCGGCGATG CGGGCTCGCC TGAAGTGCTC
AGAGCCATCG GCGCCGCTCG CGCGTCTTGT GCTATCGTCG CCCTCAGTTC GCCGGCCGCG
AACTATCGCG CCGTGTGGTC GTTGACGAAG AACTTTAGCA ACATCCACAC GTACGTAAGA
GCCGAAGGCG TCGAGGGTGG TTTGATTCTC GAAAAGGCGG GCGCGAAAGC CGTCGTTCCG
GAGGCCCTCG AACCGTCCCT TCAGCTCGCC GCCGCATGTT TGCGCGAGCA GAAAATGTCG
CCGCAAGACA TCAGTGTGGC GATTGACAAC TACAGACGAA GTCATCTCAA GAGTTTGTCA
TCGCGCAAAT TTTCCGCCGA CTATTCCAGC GTCAACTACG GCGGCGTCGG TCAGTCCCTT
GATATGTCTT CGACCGACGA AGCTGAAGTC GCATCCGCGT AG
|
|---|
| Protein sequence | MSDLLWLLFT SVLAVTIVSK IPGGSPVLGF LVGGALVGPF GLGIIQHVEQ VKVLAEFGVV
FLLFNIGLEL SYDRLVSMAK YIFGLGSSQM MLSTAVGAAV AVACGLAIPP AVIVGLGLAF
SSTAVALQVL ADRGESASRH GRATFSVLLF QDLTVVLVFM LVPLLAGPDS GSLTAIGGSL
LKAVVKTAAA IVSIIGLGRV VLRPVFDRVA KLRQAELMSA TTLFVALGTS LLTQSLGLSM
ALGAFLAGLL LAETEFHLQV ENDIAPFRGL LLGLFFMTVG MTIDPMTFTQ SAGNIVSMMA
AILIGKIAVV AAVGPMFGLS LLNCIRAGMY IGPGGEFAFV TFAEAVRVGL FSPDLATQLN
LAVVLTMAIT PYLAEVGNSM KDVWKSGNVA TLQPKENEVD DLKGHVILAG YGRNGKIIGE
ILSANMIPFV ALDVNPEIVS EGRAADQNVY FGDAGSPEVL RAIGAARASC AIVALSSPAA
NYRAVWSLTK NFSNIHTYVR AEGVEGGLIL EKAGAKAVVP EALEPSLQLA AACLREQKMS
PQDISVAIDN YRRSHLKSLS SRKFSADYSS VNYGGVGQSL DMSSTDEAEV ASA
|
|---|
| |