| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_45715 |
|---|
| Symbol | |
|---|
| ID | 5001845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009359 |
|---|
| Strand | + |
|---|
| Start bp | 376061 |
|---|
| End bp | 377700 |
|---|
| Gene Length | 1640 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | |
|---|
| GC content | 62% |
|---|
| IMG OID | 640417266 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001417753 |
|---|
| Protein GI | 145346558 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
|---|
| TIGRFAM ID | [TIGR00591] photolyase PhrII |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.380145 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.059566 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TCCCCGAAAA CGCCCGCGGT GACGTCGGCG CCCGCGCGTC GCGACGAGCG CGCGCGCGAG
GGCGAACCCG TGGAGGTGTT CGCCGCGCAC TCGCCCTACG ACGCGCTGTG CGTGCTCGTG
GCGCTCGTTC TCGGGCTGTT TCGAGCGGCG AGCGCGCGGT GCAGCTGCTG AATCGAGTCG
AAACGATGAA GCGCGAAGAC GCGCTGCGCG CGACGAGCGC GACGCTGCGC GCGCGATCCG
TGCACGAAGC TCGCGTGCGA CGATTGAACG ACGCGCGCGC GAGGGAGGCG CCGGATGGGG
CGTACGTGTT GCTCTGGGCG CAGAGCGCGC AGAGGACGCG CTGGAACGAG GCGTTGGAGT
ACGCGGTCGA CCGGGCGAAC GATAGACGCG CGCCGCTCGT GGTCGTGTTT TGCTCGACGG
CGACGTACCC GGAGGCGAAC GAACGACACG TTGGGTTCAT GTTGGAGGGG TTGTGTGAGA
TGCGGGCGAC GCTCGGGAAG CGGCGAATCG CGTTCGAGGC GTTCGCGTGC GCGCCGCCGG
AGGCGGCGCT GGCGGCGAGC GAACGAGCGA TCGAAGTGGT GACGGATTCG GGGTATTTAC
GGTTACTTCG CGCGTGGCGG GATGACTTGG CGCGGAGGGC AACGTGCGCG GTGACGGAGA
TCGAGACCGA GTGCGTGGTG CCGCAGTTGG GGCAGGGGGC GCGACGCGCG GAACCGTCGG
CGGCGACGTT TCGGCCGAAG GTGCTGGCTC GCGTGCGGGA GTTCACTAGA AACGCGTGCG
CCGTGCTGCC TTACATCGCG GGCGAACTGG ATGACGCGAC GCGCGCGATT TTTGAGAAGA
CTGTCGACAA GTACGAGCGG CTGCCGCTCG AGCGAGGCGT CGACGCGTGC TTGAACGTCC
TCGACGCTTA CGGGCTAAAG CGAGATCCCA GCTGTCCTCG CGTGTCGTCT CACGTCGGTG
GAGAGTCTCG AGCCAAGGCG AAGCTCGATG TGTTTTTGAC GAAAAACATG CTCTCGCGCT
ATCATCATTC GCGTAACGAT CCGTGTTTGT GTTTGCAGAG TCATCTGTCG CCGCACATTC
ACTACGGGCA AATCTCCGTC GTCGAAGTGG CTCGCAAAGC GCTCGCGTTT CGCGACGCAC
ACGCCGATGA AGCCGACATC TGTGCAAGCG TGGATGTTTT CCTCGACGAA CTCATCGTAC
GAAGAGAGTT GGCGGTGAAT TTTGCGCTGC GAAACCCAAA GTATGATTCT TACGACGGGC
TTCCCGAATG GGCGCGAGAG ACGCTGGAGA GGCATCGAGG TGATCGCCGC GAATGGACGT
ATACACTCGA GGAGTTTGAA CACGGCCGAA CGCACGATAA GTTATGGAAT GCATCGCAAC
GAGAGCTTGT GTCCAGTGGT AAACAACACA ATTACTTGCG AATGTACTGG GGAAAGAAAA
TCCTCGAATG GAGCTCGACG CCAGAAGAGG CTTGGCGTAT CGCGATGACG CTCAACAATA
GATATTCACT CGACGGTCGA AATATGGTTT CTTTGACCGG CGTGGGATGG TGTTTCGGCC
TGCACGACCG TGAATTCCAC GAGGCGAGCA TAACTGGCAC GATTCGACGC TTTTCTGAAT
CTGGCATGCG CAAGAAGTTC
|
|---|
| Protein sequence | MKREDALRAT SATLRARSVH EARVRRLNDA RAREAPDGAY VLLWAQSAQR TRWNEALEYA
VDRANDRRAP LVVVFCSTAT YPEANERHVG FMLEGLCEMR ATLGKRRIAF EAFACAPPEA
ALAASERAIE VVTDSGYLRL LRAWRDDLAR RATCAVTEIE TECVVPQLGQ GARRAEPSAA
TFRPKVLARV REFTRNACAK TVDKYERLPL ERGVDACLNV LDAYGLKRDP SCPRVSSHVG
GESRAKAKLD VFLTKNMLSR YHHSRNDPCL CLQSHLSPHI HYGQISVVEV ARKALAFRDA
HADEADICAS VDVFLDELIV RRELAVNFAL RNPKYDSYDG LPEWARETLE RHRGDRREWT
YTLEEFEHGR THDKLWNASQ RELVSSGKQH NYLRMYWGKK ILEWSSTPEE AWRIAMTLNN
RYSLDGRNMV SLTGVGWCFG LHDREFHEAS ITGTIRRFSE SGMRKKF
|
|---|
| |