Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_44277 |
Symbol | |
ID | 5004395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009365 |
Strand | + |
Start bp | 432190 |
End bp | 433293 |
Gene Length | 1104 bp |
Protein Length | 368 aa |
Translation table | |
GC content | 58% |
IMG OID | 640419816 |
Product | predicted protein |
Protein accession | XP_001420339 |
Protein GI | 145351984 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00870525 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGTCGC AAACGGGCGC GATCAAGCGA CTCGCGAGCA AGGCGTTTCG AGGCGTGAAC GTGGACGGAT TCGCGTTCCA ATCGCCCGAC GTGCGATGCT ACGTGCTGAC GCACTTTCAC GCGGATCATT ACTGCGGCCT GAGCGGCTCG TTCGGTAAGG ACGGCGATGA GGCGAAGATA TACTGCTCTG AAATAACCGC GCGATTGGTG GTGGAATTCC TGGGCGTGAA GCGCGAGCGC GTGGTCGGGT GCGAGCTGGG ACGGGGGACG ACGCTGCGAG GCGCCGGGAC GCGCGGGGAC GACGTGGAGG CGACGTTCGT GGACGCGAAT CATTGCCCGG GCGCGTGTTT GGTGTTTTTT AGAAATAAAA TAACGGGGGA GACGCTGTTG CATACCGGAG ATTTTCGAGC GGCGGCGCGC GTGCGGAACG ATGGGACGCT GAGAGAGTTG TTGACGACGT GTCGGGACGG ATCGGTGGAT GAGGTGATGC TGGATACGAC GTATTGCGAA AAGAAGTGGA CGTTTCCCGA TCAAGACGTG GTGCTGAATA AGATGAGACA GATCGCGCGG GATGAACTCG CGCGAGAACC GCGGACGCTG TTCTTGTGTG GGTCGTATTC GATCGGGAAG GAGCGGGCGA TTCAAGCCGT GTGTCAGGGG GCGCAGAGTC GAGCGAGCGT CACGGCGAGA CGAAAGAAAT CGCTCGAATT GAGCGGGTGG TGGCGCGATG ATGCGTTTGT GTGCGAAGAC GATGACGCCG AAGAAGCCGC ACGATGCCAA GTGCGCGTGT GTGGCCTCGG AAAAGGCTCA AATCATCGCG CGATGATGGA AATTATGGCA AAGGAGGCAC CGCGATGGCG CGCCGCCGTC GCGTTTTCGC CCACCGGCTG GAGTTATACG AAGAAAATGG ACGAAGACGG GTTTAACGTG AACCCCTGGA TAGAAAACGA AGGACGCACG CGCACGTATG CGATTCCGTA CAGCGAGCAT TCGAGCTACA CCGAGTTGCG GGAATTTATA AAATTCTTAA AGCCGAAGAA AATCACCCCG ACGGTGAACG CGATCACGCC CAAGGATAGA GAAAAGTTGG TGAACAAACA CTTT
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Protein sequence | MASQTGAIKR LASKAFRGVN VDGFAFQSPD VRCYVLTHFH ADHYCGLSGS FGKDGDEAKI YCSEITARLV VEFLGVKRER VVGCELGRGT TLRGAGTRGD DVEATFVDAN HCPGACLVFF RNKITGETLL HTGDFRAAAR VRNDGTLREL LTTCRDGSVD EVMLDTTYCE KKWTFPDQDV VLNKMRQIAR DELAREPRTL FLCGSYSIGK ERAIQAVCQG AQSRASVTAR RKKSLELSGW WRDDAFVCED DDAEEAARCQ VRVCGLGKGS NHRAMMEIMA KEAPRWRAAV AFSPTGWSYT KKMDEDGFNV NPWIENEGRT RTYAIPYSEH SSYTELREFI KFLKPKKITP TVNAITPKDR EKLVNKHF
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