Gene OSTLU_44277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_44277 
Symbol 
ID5004395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009365 
Strand
Start bp432190 
End bp433293 
Gene Length1104 bp 
Protein Length368 aa 
Translation table 
GC content58% 
IMG OID640419816 
Productpredicted protein 
Protein accessionXP_001420339 
Protein GI145351984 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00870525 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGTCGC AAACGGGCGC GATCAAGCGA CTCGCGAGCA AGGCGTTTCG AGGCGTGAAC 
GTGGACGGAT TCGCGTTCCA ATCGCCCGAC GTGCGATGCT ACGTGCTGAC GCACTTTCAC
GCGGATCATT ACTGCGGCCT GAGCGGCTCG TTCGGTAAGG ACGGCGATGA GGCGAAGATA
TACTGCTCTG AAATAACCGC GCGATTGGTG GTGGAATTCC TGGGCGTGAA GCGCGAGCGC
GTGGTCGGGT GCGAGCTGGG ACGGGGGACG ACGCTGCGAG GCGCCGGGAC GCGCGGGGAC
GACGTGGAGG CGACGTTCGT GGACGCGAAT CATTGCCCGG GCGCGTGTTT GGTGTTTTTT
AGAAATAAAA TAACGGGGGA GACGCTGTTG CATACCGGAG ATTTTCGAGC GGCGGCGCGC
GTGCGGAACG ATGGGACGCT GAGAGAGTTG TTGACGACGT GTCGGGACGG ATCGGTGGAT
GAGGTGATGC TGGATACGAC GTATTGCGAA AAGAAGTGGA CGTTTCCCGA TCAAGACGTG
GTGCTGAATA AGATGAGACA GATCGCGCGG GATGAACTCG CGCGAGAACC GCGGACGCTG
TTCTTGTGTG GGTCGTATTC GATCGGGAAG GAGCGGGCGA TTCAAGCCGT GTGTCAGGGG
GCGCAGAGTC GAGCGAGCGT CACGGCGAGA CGAAAGAAAT CGCTCGAATT GAGCGGGTGG
TGGCGCGATG ATGCGTTTGT GTGCGAAGAC GATGACGCCG AAGAAGCCGC ACGATGCCAA
GTGCGCGTGT GTGGCCTCGG AAAAGGCTCA AATCATCGCG CGATGATGGA AATTATGGCA
AAGGAGGCAC CGCGATGGCG CGCCGCCGTC GCGTTTTCGC CCACCGGCTG GAGTTATACG
AAGAAAATGG ACGAAGACGG GTTTAACGTG AACCCCTGGA TAGAAAACGA AGGACGCACG
CGCACGTATG CGATTCCGTA CAGCGAGCAT TCGAGCTACA CCGAGTTGCG GGAATTTATA
AAATTCTTAA AGCCGAAGAA AATCACCCCG ACGGTGAACG CGATCACGCC CAAGGATAGA
GAAAAGTTGG TGAACAAACA CTTT
 
Protein sequence
MASQTGAIKR LASKAFRGVN VDGFAFQSPD VRCYVLTHFH ADHYCGLSGS FGKDGDEAKI 
YCSEITARLV VEFLGVKRER VVGCELGRGT TLRGAGTRGD DVEATFVDAN HCPGACLVFF
RNKITGETLL HTGDFRAAAR VRNDGTLREL LTTCRDGSVD EVMLDTTYCE KKWTFPDQDV
VLNKMRQIAR DELAREPRTL FLCGSYSIGK ERAIQAVCQG AQSRASVTAR RKKSLELSGW
WRDDAFVCED DDAEEAARCQ VRVCGLGKGS NHRAMMEIMA KEAPRWRAAV AFSPTGWSYT
KKMDEDGFNV NPWIENEGRT RTYAIPYSEH SSYTELREFI KFLKPKKITP TVNAITPKDR
EKLVNKHF