| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_44172 |
|---|
| Symbol | |
|---|
| ID | 5004340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009365 |
|---|
| Strand | - |
|---|
| Start bp | 197412 |
|---|
| End bp | 200042 |
|---|
| Gene Length | 2631 bp |
|---|
| Protein Length | 876 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | 640419761 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420443 |
|---|
| Protein GI | 145352201 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0058] Glucan phosphorylase |
|---|
| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.079411 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGCG ATCGCGCGGA CGTGACCGAG TCATCGTTCT TGGAGAGCGC GACGACGATC
CTCGATCGCC CGCGTCAGTA CGTCGACGAT GCAGAGATGG GCGTCGATCA CTTGGCGCAC
AAGGAGTTGT TGTGGAAGCT ATCGAGCACG TACTTGCCAA ACGACGTGGC GAGTTTGCAG
CGATCGTTGG TGCGGCACGT GGAGTATACG CTCGCGCGAA GGAGGTACAA GCTCGATACG
AGCTCGTTTT ATCAAGCCAC CGCGCACTCG GTGCGAGATC GATTGATCGA GCGATGGACG
GACACGCAGC AGTATTCGGC CAAGAAAGGG GCGAAGAAAG TGTACTATCT GTCGCTCGAA
TTTTTAATCG GCCGCTCGCT CGGCAATGCC GTCTCAAATC TCGGGTTACG AGGCGCCTAC
GCCGAGGCTT TGCGGCAGAT TGGATACGAT TTGGAAGATA TCATGTCAGA GGAAAAAGAG
CCAGCGCTCG GGAACGGGGG TCTGGGGCGC TTGGCGTCTT GTTTCTTGGA CACGCTCGCG
ACGCAAAATT ATCCCGCGTG GGGGTACGGC ATTCGCTACA AGTACGGAAT GTTTGAGCAA
AGAATCGTGA ATGGTAAACA AGTGGAGTTT CCAGATTATT GGCTTACCGA TGGGAACCCG
TGGGAAGTTG AACGATTAGA CGTGCAGTAC CCGGTTCGTT TATTCGGCCA CGTTCGAGAG
TTTCAAGATC CGGACGGGAA CACGTTGTAC GCGTGGGAGG GCGGCGAAGT CGTCATGGCG
CAGGCGTACG ATACCCCGAT TCCAGGCTAC GGTACGTACA ACACCAACAA TATGCGACTG
TGGAGTAGCA AGCCATCGCA CGAATTCAAT CTCGCCTCGT TTAACGCCGG TAATTACTAC
GGCGCGGTCG AGGCGAAGGA ACGTTGCGAG AGTATCACGT CAGTGCTGTA CCCGAACGAC
GCCACGGAAG AAGGTAAGCG TTTGCGATTG AAGCAACAAT ACTTCTTCGT CAGCGCGACT
TTACAAGACA TCTATAGACG TTTCAAGAAG AACGTCGGTC GTGGGTCTAC GACGATGAAG
AATATGCCGG ACAAGGTGGC GATACAGCTC AACGACACGC ACCCGGCGAT TGCTATTCCC
GAACTCATGC GTTTGCTCCT CGACATCGAG CGTCTACCTT GGGACGAGGC GTGGGAAATA
ACGAGAAAAG TCTTCGCGTA CACCAACCAC ACCATTCTCC CGGAGGCACT GGAGAAGTGG
CCGGTGCCGA TGATCACCGA GCTCTTGCCG CGACACATGC AAATCATTTA CGAAATCAAC
CACCGGTTTT TGCTTGAGGT TCAAAAGATG TGGCCAAACG ACACCGCGCG CATGTCGTCG
ATGAGTATCA TCGAAGAGTC ATCACCCAAG ATGGTACGCA TGTCCAACTT AGCCGTCATC
GGGTCGCACA CCGTAAACGG GGTGGCGATG ATCCACACCA AGCTTTTGAA GTCTTTGCTA
TTCCCCGACT TTTTGTTGAT GTGGCCAGAA AAGTTCATCA ACGTGACGAA TGGTGTCACG
CCGCGACGAT GGCTGTTGCA AGCGAATCCA GCGCTCGCGA GCATTTACAC GGGCATGGTC
GGCCCTGGGT GGGTAAACGA TCTCAAGCGA CTCGAGCCGA TCAAGACGAT GGCGCAAGAT
CCGCAATTTC GACAGCGTTG GCGCGCGGCC AAGCAAACGA ACAAGCAAGC GCTTGCGGAA
TGGCTGTACC GTTCGATGAA TATCCGCGTC GATCCCAACG CCTTGTTCGA CATGCAAATC
AAACGCATAC ACGAATACAA GCGCCAGTTG TTGAATGTCC TTGGAATCGT GCACCGCTAC
GCCGAAATCA CGCAGGCTAC GCCCGAACAG CGCAAAACAA TGGTGCCGCG CGTGCACATC
ATCGCCGGCA AAGCTGCGCC CGGATACGTC ATGGCGAAAA ATCTTGTCAT GCTCGTATGC
GCCGTGTCTG AAGTCGTGAA CTCCGACGCG GCGTGTCGTG ACTTACTCAA GGTGGTGTTC
GTTCCCAACT TCAACGTGTC TCTAGCGGAG ATTCTCATTC CCGCGAGTGA TATCTCGCAA
CACATCTCCA CTGCGGGTAT GGAGGCGAGC GGCACCGGGA ACATGAAGTT CGTCATGAAC
GGCGGATTGA TCGTGGGTAC AATGGACGGG GCGAACATCG AGATAGAACA AGCGATTGGC
GAGCATAACA TGTTCACGTT TGGCGCGAAG GCGGATCAAG TCGCGGCGAT TCGACGCAAG
ATGGCGCACG ACCCACCAAA AATTGATCCT CGTCTTCACC GCGCCATGGG AATGATTCGC
GCCGGCATCT TCGGCAAGCC GGACGACGGA GCGTACAACC AGCTCTTGGA CGCCATCGAT
CCGAGGAAAG ACGTCTACCT CACCGCGCAT GATTTTCCGT CGTATCTAGG GGCGATTGCA
GAAGCCGATG CGGCGTATCA GTACGAAGAG AAGTGGACCG CAAAGTGCAT CGAAGCTGCG
TGTTCGATGT GGATGTTTTC ATCCGATCGC ACGATTCGGG AGTACGCGGC GAAGATTTGG
AACGTCGAAC CTTTGCCGTT TCGACCGCCC AGACACCACA GTGAACGTTG A
|
|---|
| Protein sequence | MESDRADVTE SSFLESATTI LDRPRQYVDD AEMGVDHLAH KELLWKLSST YLPNDVASLQ
RSLVRHVEYT LARRRYKLDT SSFYQATAHS VRDRLIERWT DTQQYSAKKG AKKVYYLSLE
FLIGRSLGNA VSNLGLRGAY AEALRQIGYD LEDIMSEEKE PALGNGGLGR LASCFLDTLA
TQNYPAWGYG IRYKYGMFEQ RIVNGKQVEF PDYWLTDGNP WEVERLDVQY PVRLFGHVRE
FQDPDGNTLY AWEGGEVVMA QAYDTPIPGY GTYNTNNMRL WSSKPSHEFN LASFNAGNYY
GAVEAKERCE SITSVLYPND ATEEGKRLRL KQQYFFVSAT LQDIYRRFKK NVGRGSTTMK
NMPDKVAIQL NDTHPAIAIP ELMRLLLDIE RLPWDEAWEI TRKVFAYTNH TILPEALEKW
PVPMITELLP RHMQIIYEIN HRFLLEVQKM WPNDTARMSS MSIIEESSPK MVRMSNLAVI
GSHTVNGVAM IHTKLLKSLL FPDFLLMWPE KFINVTNGVT PRRWLLQANP ALASIYTGMV
GPGWVNDLKR LEPIKTMAQD PQFRQRWRAA KQTNKQALAE WLYRSMNIRV DPNALFDMQI
KRIHEYKRQL LNVLGIVHRY AEITQATPEQ RKTMVPRVHI IAGKAAPGYV MAKNLVMLVC
AVSEVVNSDA ACRDLLKVVF VPNFNVSLAE ILIPASDISQ HISTAGMEAS GTGNMKFVMN
GGLIVGTMDG ANIEIEQAIG EHNMFTFGAK ADQVAAIRRK MAHDPPKIDP RLHRAMGMIR
AGIFGKPDDG AYNQLLDAID PRKDVYLTAH DFPSYLGAIA EADAAYQYEE KWTAKCIEAA
CSMWMFSSDR TIREYAAKIW NVEPLPFRPP RHHSER
|
|---|
| |