| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_43398 |
|---|
| Symbol | |
|---|
| ID | 5005373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009368 |
|---|
| Strand | - |
|---|
| Start bp | 24306 |
|---|
| End bp | 26000 |
|---|
| Gene Length | 1695 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | |
|---|
| GC content | 67% |
|---|
| IMG OID | 640420794 |
|---|
| Product | APC family transporter: amino acid |
|---|
| Protein accession | XP_001421369 |
|---|
| Protein GI | 145354178 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.797401 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTGA CGCGCGACCG CCTCGGGACG ACGACGACGG CGACGGCGAC GGCGACGGCG
ACGGCGGACG ACGCGCGCGG CGCGAGCGGG GCGCTGCGAA AGGTGCTGAC GCGCGCGGAC
CTGACGACGC TCGGCGTGGG CGGGATCATC GGGGCGGGCG TGTTCGTGCT CACGGGGTCG
GTGGCGAGGG AACACGCGGG ACCGGCGGTG GCGGCGTCGT ACGCGCTGAG CGCGTTTACG
AGCGCGGTGA CGGGATTGGC GTACGCGGAG TTCGCGGTGG CGATGCCGGT GGCGGGGAGC
GCGTATAATT ACGTGTACGG CACGTTCGGG GAGTACGCGG CGTTTCTCAC GGGGTGTAAT
CTGGCGCTGG AGCTCACCAT AGCGAGCGCG GCGATCGCGC GCGGGTGGAC GTCGTACGCG
ACGGCGGCGT TCGGCGTCGA GGCGCGGCGC GCGCGAGTGC GCGTGATCGA TGGGTTGATG
GAGATAGATT TAATAGCTGG GATCGTGGTT TGCGGCATGA CGGCGCTGCT CGTGAGCGGG
GCGAAACAGA CGGCGCGGTT TAACGCGGCG GTGACGTACG CGAGTTTGGT CGTCGTCGCC
GTCGTTCTCT TGGCGGGCGC GCCGGAGATT CAACCGTCGA ATTGGACGCC GTTCGCGCCG
TACGGGATGC GTGGAATAAT ATCCGGTGCG TCGGTGGTGA TTTTTGCCTT CGTCGGTTTC
GACACCGTGG CGACGTGCGC GGAAGAAGTC GCCAATCCCG CGGCGGATTT GCCGTTTGGT
ATTTTGGGAT CGCTCGGGAT TTGCGCGGCG TTGTACTGCG CGATGTGCGT CGTGATCACG
GGCATGGTTT CGTACGACGA CATCGACGTC AACGCCCCGT TCGCGATGGC GTTCACGGCG
TACGGTATGC CCGCGATCGC GACCATCGTG TCCATCGGCG CCGTCGCCGC CATCACGACG
TCGCTGTTGC TTTCGATGAT GGGGCAGCCG CGCATCTTCA TGGTGATGGC GCGAGACGGT
TTGCTCCCGA AGTGGTTCTC GCGCGTCAGC GAAAAGCACG GCACGCCGGC AAACGCGTCG
ATATTCAGTG GCGCCGTCAC CGGCGCGCTG GCGGTGCTGT TGGACATCAA CATACTCGCC
CAGCTCGTGA GCATCGGCAC GTTGAGCATC TTTTGCGGCG TTAATTTGGG ACTCATCGTG
TCCAGATGCG CGCCTCGAGA CGACGACGAT TTCGCCCGTC GCGCGCCGGC TTTGAAGCGC
GCGGGCGCGC TCTTCGTCTC ATCGATGGCG TTCGGCGTGG ACTACCGCGC GCGCGCGCGA
ATCTCCTGGT TTGGCGCCGT CGCCCTCGCC GCCGTCGTCG CGAGCGCGTG CAGCTTTTTG
ACGCTTCCGA TGACGCACGC GCCGAAGACG TTTCGCGCCC CGTTCGTCCC TTTCCTCCCC
GCTTTAGGCG TCCTCCTGAC GTGCGTCTTA ATCGCCGGTC TCGGCGCTCT GGCGTGGATT
CGATACGCCG TCTACACCGT CCTGTGTTCC GTCGGCTATC TCTCCTTCGC CGTTCGCAGG
TCGCGCGAGT CCCCCGAAGG CGTCGACGCC GTCGAGCTCG CCGTCGTCGA CGCCGCCGAC
GCCGACGCCG ACGCCGACGC CGACGCCGGT GACGCCGTCA CGCTCCTCCC CGTCTCCGCC
CGACCCTCTT CCTAG
|
|---|
| Protein sequence | MRVTRDRLGT TTTATATATA TADDARGASG ALRKVLTRAD LTTLGVGGII GAGVFVLTGS
VAREHAGPAV AASYALSAFT SAVTGLAYAE FAVAMPVAGS AYNYVYGTFG EYAAFLTGCN
LALELTIASA AIARGWTSYA TAAFGVEARR ARVRVIDGLM EIDLIAGIVV CGMTALLVSG
AKQTARFNAA VTYASLVVVA VVLLAGAPEI QPSNWTPFAP YGMRGIISGA SVVIFAFVGF
DTVATCAEEV ANPAADLPFG ILGSLGICAA LYCAMCVVIT GMVSYDDIDV NAPFAMAFTA
YGMPAIATIV SIGAVAAITT SLLLSMMGQP RIFMVMARDG LLPKWFSRVS EKHGTPANAS
IFSGAVTGAL AVLLDINILA QLVSIGTLSI FCGVNLGLIV FLTLPMTHAP KTFRAPFVPF
LPALGVLLTC VLIAGLGALA WIRYAVYTVL CSVGYLSFAV RRSRESPEGV DAVELAVVDA
ADADADADAD AGDAVTLLPV SARPSS
|
|---|
| |