Gene OSTLU_42681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_42681 
Symbol 
ID5003163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009362 
Strand
Start bp512254 
End bp513123 
Gene Length870 bp 
Protein Length290 aa 
Translation table 
GC content62% 
IMG OID640418584 
Productpredicted protein 
Protein accessionXP_001419185 
Protein GI145349531 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1222] ATP-dependent 26S proteasome regulatory subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.539855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGCGG GGGTGCGTTT GAACGCGGAG AAGGAGAAGA GCACCGGCGC CATCGCAGAC 
GACGACGAAG CCTTCAGGCT TCGCGAGTCG AGACGATTGG ACAAGGACAA GGAATTGATT
CCACGAGTCG TCATCGGTGG TGGTCTTGGT ACGTCGACGT ACTCCGCCGG CTGGGAGTCT
CTCGCAGGCA TGGAGGAGCA CGTCAAGACG CTCAAGGAGT TGACGCTCCT GCCGCTCGCG
TACCCGGAGA TGTTTGAAAG TCTCGGCGCG GGCGCCGCGC GTGGCGTGCT TTTGCACGGA
CCTCCAGGAA CGGGAAAAAC AGCCGCTGTG CGTGCGATGC TCGGCGCCGC GGCGAGAGGA
CCGAGACCGA TTAGCTTTTT TAGCCGGCTC GGCGCGGATT GTTTGGGCAA GTACAGCGGC
GAAGCCGAGC GCAAGCTCCG GTTGTTGTTT GAAGAGGCCG AAAAGCGCCA GCCGAGCATC
ATATTTTTCG ACGAAATCGA TGGTTTGGCA CCCGCGCGTC GAGGTGGTGG CGGCTCGGGC
GCGCAGGATG AGATTCACTC CTCAGTCGTC GCCACTTTGC TCGCGCTCAT GGATGGTTTG
TCTGGTCGAG GGTCTGTTGT TGTTGTCGCA TCGACGAATC GTCCCGACGC CGTCGATCCC
GCTCTGCGCC GACCTGGGAG ATTCGATCGC GAGCTATTTT TTGGTCTTCC AGACGCTGAA
GCGCGTGCGG ACATATTAGC CGTGCACACG CGCGCCTGGA CGCCTCGGCC GAGTCGCGAG
ACGCTCGAAG CAGTCGCGAG CCGCACGGAG GGTTGTGCCG GTGCTGACTT GCGCGCGGTC
GCGAACGCGG CGTTGATGAG TGCGCTCAAG
 
Protein sequence
MEAGVRLNAE KEKSTGAIAD DDEAFRLRES RRLDKDKELI PRVVIGGGLG TSTYSAGWES 
LAGMEEHVKT LKELTLLPLA YPEMFESLGA GAARGVLLHG PPGTGKTAAV RAMLGAAARG
PRPISFFSRL GADCLGKYSG EAERKLRLLF EEAEKRQPSI IFFDEIDGLA PARRGGGGSG
AQDEIHSSVV ATLLALMDGL SGRGSVVVVA STNRPDAVDP ALRRPGRFDR ELFFGLPDAE
ARADILAVHT RAWTPRPSRE TLEAVASRTE GCAGADLRAV ANAALMSALK