Gene OSTLU_41967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_41967 
Symbol 
ID5006245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009371 
Strand
Start bp47226 
End bp47930 
Gene Length705 bp 
Protein Length235 aa 
Translation table 
GC content56% 
IMG OID640421666 
Productpredicted protein 
Protein accessionXP_001422085 
Protein GI145355690 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0464] ATPases of the AAA+ class 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.296814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0690197 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGCT TGTTGTGGGC GCAGCGCCAC GCTCCGCGAG CGTTTACAGA TTTATTGAGC 
GTCGAGCACG TCAATCGAGA GGTGGTGCAT TGGATCAAGG GTTGGGATAA GGTTGTTTTC
GATCGAAATC CTCCGCCGGC GACGATGAAG AAATTTTACG CCGATCGATA CGCCGAAAAA
GCTGGGTTGA AGAAGCGAAG CGGCACGACG GAGACGCACG TGCAGCTCGA CCGCAAGCAA
CGTCCGATGG AGAAGATTCT TCTTCTCTCC GGTCCACCGG GCGCGGGTAA GACGACGCTG
GCGCATGTCG CGGCCAAGCA CTGCGGGTAC GAGACGATTG AAATCAACGC GTCCGATGAC
CGAAGTGCGT CCACGTTAAA GTTGAAGCTC GCGGACGCGC TGCAAACGCG AAGCGCCTTT
GAGAAGCAAA AGCCAAAGTG CGTGATCATC GATGAAATCG ATGGTGTACA CAACGGAGGC
GGCGGCGGTG GAGCCATTTG GACCGTGATG CACGCGTTAA AAGATGTCAA AGGTCAAGCG
CCGTTGTGTC GACCGATCAT CGCCATCTGC AACGATTTGT ATGCCCAAGT GTTGCGACCG
CTCCGCGACG TCGCCAAGAT TATTCGAATG AAACCGCCGC AAACTTCACA TCTCACGGCT
CGCATCAGAG ACGCGTGCTT GAAGGAAAAT GTTGACATCG AACCG
 
Protein sequence
MGGLLWAQRH APRAFTDLLS VEHVNREVVH WIKGWDKVVF DRNPPPATMK KFYADRYAEK 
AGLKKRSGTT ETHVQLDRKQ RPMEKILLLS GPPGAGKTTL AHVAAKHCGY ETIEINASDD
RSASTLKLKL ADALQTRSAF EKQKPKCVII DEIDGVHNGG GGGGAIWTVM HALKDVKGQA
PLCRPIIAIC NDLYAQVLRP LRDVAKIIRM KPPQTSHLTA RIRDACLKEN VDIEP