Gene OSTLU_4121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_4121 
Symbol 
ID5004899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009366 
Strand
Start bp471406 
End bp472266 
Gene Length861 bp 
Protein Length287 aa 
Translation table 
GC content62% 
IMG OID640420320 
Productpredicted protein 
Protein accessionXP_001420702 
Protein GI145352754 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.381062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CGCGGACAGC TGTGGCTGGC GCCGCTGACG AAGGGAGGAA ACGCGCCGTT CCGACGGTTG 
TGCGCGAGCG AATTCGGGGC GGAGGTCGTG GTGAGCGAGA TGGCGTTCGC GCGATTTCTC
GCGAAGGGGG CGAGGGTGGA ACGCGCGCGG GTGCGGCGAC ACGAGGGCGA CGCTGGCGAT
TGTTTCGGGG CGCAGATCGC GACGAACGCC ATTGAGGAGG GCGTGAACGC GGCGTTGATC
GCGTCGGGGG AGTTTGGCGC GGATTTCGTG GACTTGAATT GCGGATGTCC GATTCACGAG
ACGTGGAAGC GCGGGCTCGG CGCGGCGCTG TTGAAAAAGC CGGCGAAATT GGAGCGGTTG
GTGGAGGGGA TCGCGAGTCG GATCGACGTG CCGTTGACGG TGAAGATTCG ACTTGGGATC
GATTCGTCGT CGCAGGCGCG GAGAATCGCG GAGGGGTTGG AAAATGCGGG GGCGAGCGCC
GTCGTCGTGC ACGGTCGGAC GAAGGAGCAG CGGTACACCA AGGCGGCGGA TTACGACGTG
ATTCGAGACA TCGTTCGGGA ACGAAACATT CCAATCATAG GCAACGGCGA CGTGTTGACG
TGGTACGATG CGCGCGATCG AATGGAGCAC TCTGGAGTGG CTGCGATGAT GGTCGGTCGA
GGGGCGTTGA TCAAGCCGTG GATATTCAAA GAGTATCGCG AGCGCAAGTG CTGGAATCCA
ACCGTGGAAC AGCGCGTGGG GGTGTATTAC ACGCTGCGTA ATTACATGCG GGAAGGCTTC
GGGGACGACG AACTGGGTAA GCGACGGTTT GATGAGTTTT TTCCGTGGCA TCTAGGCTTT
TTTTGTCGAT ACCGCCCGCT G
 
Protein sequence
RGQLWLAPLT KGGNAPFRRL CASEFGAEVV VSEMAFARFL AKGARVERAR VRRHEGDAGD 
CFGAQIATNA IEEGVNAALI ASGEFGADFV DLNCGCPIHE TWKRGLGAAL LKKPAKLERL
VEGIASRIDV PLTVKIRLGI DSSSQARRIA EGLENAGASA VVVHGRTKEQ RYTKAADYDV
IRDIVRERNI PIIGNGDVLT WYDARDRMEH SGVAAMMVGR GALIKPWIFK EYRERKCWNP
TVEQRVGVYY TLRNYMREGF GDDELGKRRF DEFFPWHLGF FCRYRPL