Gene OSTLU_3956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_3956 
Symbol 
ID5004862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009366 
Strand
Start bp522308 
End bp523333 
Gene Length1026 bp 
Protein Length342 aa 
Translation table 
GC content55% 
IMG OID640420283 
Productpredicted protein 
Protein accessionXP_001420873 
Protein GI145353113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CGTCCGCGCC GTCCATCGTC TTGGACGGCG CGTGAAAAGA CGCAGAAGAA TATTGGGCGC 
GATTATCTCG TGGAGCTCGG GAAGAACGAC ACCGGGAACA CGAATACAAA CGTCGGCGCC
CGACAAGGTG TAGTGGACGA CGTCTTCACG CGCAACGCCA CTGGCGAGTT TCAACTCGGC
GCTGATTCCG ACATCGCGAG CGGCGAGCTT CGGTACCGGT ATCAAGAGGC TAGAAAGTTT
AAAAATTTAG TCGGCGATTA CCACTGTCCA CCGGCTTTCA TGGAGAAGGT GAGCGGGCAC
TTGGTGAAGA ACTTTTTATT TGGCGGCGGC TTGCGACACG TGCGAGAGAT GACAAACGAA
GCCGGAGTCG TGGTTCAACC GCCTAACACC CCGCTGATTT TGGGTGTTTG GGGCGGCAAG
GGTTGCGGGA AATCGTTTAA TTTGGAACTT GCGTGTAAAG CCATGGGTGT GACGCCGATC
ATCACGAGCG CTGGTGAGTT GGAGGACGAA AACGCCGGCG CGCCAGGGCG GTTGATTCGC
GAGCGATACA AGCGCGCAGG AGAAATTTTG CGACGCACGG GGGTGATGAG CTGTTTAATC
ATCAACGACG TCGATGCTGG TATTGGATGG TTCAAGGACA CGCAGCACAC GGTGAATAAC
CAAACCGTGT GTGGCACGCT AATGAATTTG TGTGATCACC CAGAACTCGT CAGTCTTGGC
GAAGATCGCG GCGAAGATGG CAAAAATTTG CAAACTGCGC GCGTGCCGAT CATCGTTACA
GGAAACGACT TATCAACGGT CTACGCGCCA TTGTTGCGCG ATGGAAGAAT GGATAAGTGG
TACTGGAATC CTAGTCGAGA CGATATCTGT GACATCGTGC ACGCACTTTT CAAGGACGAA
GTGGACTGGT CTCCAGACGC CACAGCGCGT CTAGTCAATG CGTTCCCGGG TCAGCCGTTA
GACTTTTTTG GTGCCGCGCG GGCCAAAGTA TACGACGACG CCGTATCACG TTGGATGTGC
GAGGTC
 
Protein sequence
RPRRPSSWTA REKTQKNIGR DYLVELGKND TGNTNTNVGA RQGVVDDVFT RNATGEFQLG 
ADSDIASGEL RYRYQEARKF KNLVGDYHCP PAFMEKVSGH LVKNFLFGGG LRHVREMTNE
AGVVVQPPNT PLILGVWGGK GCGKSFNLEL ACKAMGVTPI ITSAGELEDE NAGAPGRLIR
ERYKRAGEIL RRTGVMSCLI INDVDAGIGW FKDTQHTVNN QTVCGTLMNL CDHPELVSLG
EDRGEDGKNL QTARVPIIVT GNDLSTVYAP LLRDGRMDKW YWNPSRDDIC DIVHALFKDE
VDWSPDATAR LVNAFPGQPL DFFGAARAKV YDDAVSRWMC EV