Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_39168 |
Symbol | CHR3503 |
ID | 5004719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009366 |
Strand | - |
Start bp | 463396 |
End bp | 464961 |
Gene Length | 1566 bp |
Protein Length | 522 aa |
Translation table | |
GC content | 52% |
IMG OID | 640420140 |
Product | predicted protein |
Protein accession | XP_001420858 |
Protein GI | 145353082 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.129742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.87611 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGG CGGTGTTGCG CGAGTATCAA TTGGAAGGTT TGCGATGGAA CGTCGGAATG TACGATCAAG GATGCTCGTG CATCTTGGCG GATGAGATGG GTTTAGGTAA AACGTTACAG TCGATTTCGT TCTTGGCGTG CATAAAGGAG ATGCGTCACG CCAACGGACC GCACTTGGTC GTGTGCCCGC TCTCCGTGCT CTCGTCATGG ATGGACGAGT TGCAAAAATG GGCGCCGTCG TTCCGCGTCG TGCGCTTGCA TTCCGGCGAC GAAAATGAAC GTGTTCGTTT GCGAAAAGAA GTGGTGCCGA ACACCGAATC CTACGACGTC GCCGTGACGA CGTACGAGAT GGCGTGTAAC CCGGCGTTCA ACGTGACGTT GACACAAAAG GTCATGTGGC GTTGCTTGAT TCTTGACGAA GGTCATCGCG TGAAGAACGA AGAAACGGCG GCGCATCAAG TGCTAAAGCG CATCAAACGT CAACACACGC TTCTGTTGAC TGGTACGCCT ATCCAAAACA ACTTGCACGA GCTGTACGCC ATTCTTTCCT TTTTGCATCC CGACGTCTTC ACGTCAAGCG AACCATTCGA TAAGGCGTTC AATTTGAACA CCTCAGAACA CAAGGTTGAC TCAAACTTAC TGGAAAAAGC ACACTTTCTG ATGCGTCCAT TCATTTTACG CCGCGTCAAG GGTGAGGTTG AAGTGTCGCT TCCACCAAAG ACAGAGACGA AGATTATGTG CCCGTTGTCC GAGGCACAGA CGTTTTGGTA TCGACGACTC TTGCTTCGGG AAGCGACGGC TTTGCAGTCG CTCGAAAAGG CGACCAAAGG CGAAGGTGGT GCGGATAACT TCCAAAAGCT CAATTCGTTG TTGATGCAAT TGCGAAAGTG CTGCAATCAT CCGTTTTTGT TCACCGGTAC TGACGTGCCC GAAGATGGCG TGCCGATCGA GGATCTCATC TCGGCGTCTG GTAAACTCGC CGTGCTCGAC AGAATGTTGC AAAAGTTAAA AGAAGGCGGA CATAGAGTGG TGTTGTTCTC ACAGTTTACT TCCATGCTCG ACATCTTACA AGATTTCTTG ACTTTGAGAG GGTACACCTA CGCTCGTTTG GACGGGTCGA CGAATCGCGT GCAGCGTTCC ATCGACATCG CCGCCTTCAA CCGTCCAGAT TCACCCATGT TTGCGTTCTT GCTCTCCACC CGTGCCGGTG GTTTAGGTGT AAACCTTCAG ACTGCGGACA CGTGCATCTT GTTCGATAGC GATTGGAACC CTCAAGTGGA TCTTCAAGCG ATGGCTCGCG TGCACCGCAT CGGTCAGAAG AAGATGGTGC ACATTTACCG ACTTGTCACT GCGGGTACTG TCGAAGAGCG CATGACGCAG CGCGCGGAGA AGAAGCTTTT CTTGGATCAA ATGGTTTCAC GAGGTTCCAC GAAGGCTGCA GAACAATCGG ATAACCTCGA TAGGAACGAT TTGTACGCCA TGTTACGATT TGGAGTTGAC GCCGTCTTCA GTAAAGCGAG CGGCGATCCT CCAACCGATG AGGAATTGGA CATTCTCATG GACCGC
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Protein sequence | MIKAVLREYQ LEGLRWNVGM YDQGCSCILA DEMGLGKTLQ SISFLACIKE MRHANGPHLV VCPLSVLSSW MDELQKWAPS FRVVRLHSGD ENERVRLRKE VVPNTESYDV AVTTYEMACN PAFNVTLTQK VMWRCLILDE GHRVKNEETA AHQVLKRIKR QHTLLLTGTP IQNNLHELYA ILSFLHPDVF TSSEPFDKAF NLNTSEHKVD SNLLEKAHFL MRPFILRRVK GEVEVSLPPK TETKIMCPLS EAQTFWYRRL LLREATALQS LEKATKGEGG ADNFQKLNSL LMQLRKCCNH PFLFTGTDVP EDGVPIEDLI SASGKLAVLD RMLQKLKEGG HRVVLFSQFT SMLDILQDFL TLRGYTYARL DGSTNRVQRS IDIAAFNRPD SPMFAFLLST RAGGLGVNLQ TADTCILFDS DWNPQVDLQA MARVHRIGQK KMVHIYRLVT AGTVEERMTQ RAEKKLFLDQ MVSRGSTKAA EQSDNLDRND LYAMLRFGVD AVFSKASGDP PTDEELDILM DR
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