Gene OSTLU_39168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_39168 
SymbolCHR3503 
ID5004719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009366 
Strand
Start bp463396 
End bp464961 
Gene Length1566 bp 
Protein Length522 aa 
Translation table 
GC content52% 
IMG OID640420140 
Productpredicted protein 
Protein accessionXP_001420858 
Protein GI145353082 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0553] Superfamily II DNA/RNA helicases, SNF2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.129742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.87611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGG CGGTGTTGCG CGAGTATCAA TTGGAAGGTT TGCGATGGAA CGTCGGAATG 
TACGATCAAG GATGCTCGTG CATCTTGGCG GATGAGATGG GTTTAGGTAA AACGTTACAG
TCGATTTCGT TCTTGGCGTG CATAAAGGAG ATGCGTCACG CCAACGGACC GCACTTGGTC
GTGTGCCCGC TCTCCGTGCT CTCGTCATGG ATGGACGAGT TGCAAAAATG GGCGCCGTCG
TTCCGCGTCG TGCGCTTGCA TTCCGGCGAC GAAAATGAAC GTGTTCGTTT GCGAAAAGAA
GTGGTGCCGA ACACCGAATC CTACGACGTC GCCGTGACGA CGTACGAGAT GGCGTGTAAC
CCGGCGTTCA ACGTGACGTT GACACAAAAG GTCATGTGGC GTTGCTTGAT TCTTGACGAA
GGTCATCGCG TGAAGAACGA AGAAACGGCG GCGCATCAAG TGCTAAAGCG CATCAAACGT
CAACACACGC TTCTGTTGAC TGGTACGCCT ATCCAAAACA ACTTGCACGA GCTGTACGCC
ATTCTTTCCT TTTTGCATCC CGACGTCTTC ACGTCAAGCG AACCATTCGA TAAGGCGTTC
AATTTGAACA CCTCAGAACA CAAGGTTGAC TCAAACTTAC TGGAAAAAGC ACACTTTCTG
ATGCGTCCAT TCATTTTACG CCGCGTCAAG GGTGAGGTTG AAGTGTCGCT TCCACCAAAG
ACAGAGACGA AGATTATGTG CCCGTTGTCC GAGGCACAGA CGTTTTGGTA TCGACGACTC
TTGCTTCGGG AAGCGACGGC TTTGCAGTCG CTCGAAAAGG CGACCAAAGG CGAAGGTGGT
GCGGATAACT TCCAAAAGCT CAATTCGTTG TTGATGCAAT TGCGAAAGTG CTGCAATCAT
CCGTTTTTGT TCACCGGTAC TGACGTGCCC GAAGATGGCG TGCCGATCGA GGATCTCATC
TCGGCGTCTG GTAAACTCGC CGTGCTCGAC AGAATGTTGC AAAAGTTAAA AGAAGGCGGA
CATAGAGTGG TGTTGTTCTC ACAGTTTACT TCCATGCTCG ACATCTTACA AGATTTCTTG
ACTTTGAGAG GGTACACCTA CGCTCGTTTG GACGGGTCGA CGAATCGCGT GCAGCGTTCC
ATCGACATCG CCGCCTTCAA CCGTCCAGAT TCACCCATGT TTGCGTTCTT GCTCTCCACC
CGTGCCGGTG GTTTAGGTGT AAACCTTCAG ACTGCGGACA CGTGCATCTT GTTCGATAGC
GATTGGAACC CTCAAGTGGA TCTTCAAGCG ATGGCTCGCG TGCACCGCAT CGGTCAGAAG
AAGATGGTGC ACATTTACCG ACTTGTCACT GCGGGTACTG TCGAAGAGCG CATGACGCAG
CGCGCGGAGA AGAAGCTTTT CTTGGATCAA ATGGTTTCAC GAGGTTCCAC GAAGGCTGCA
GAACAATCGG ATAACCTCGA TAGGAACGAT TTGTACGCCA TGTTACGATT TGGAGTTGAC
GCCGTCTTCA GTAAAGCGAG CGGCGATCCT CCAACCGATG AGGAATTGGA CATTCTCATG
GACCGC
 
Protein sequence
MIKAVLREYQ LEGLRWNVGM YDQGCSCILA DEMGLGKTLQ SISFLACIKE MRHANGPHLV 
VCPLSVLSSW MDELQKWAPS FRVVRLHSGD ENERVRLRKE VVPNTESYDV AVTTYEMACN
PAFNVTLTQK VMWRCLILDE GHRVKNEETA AHQVLKRIKR QHTLLLTGTP IQNNLHELYA
ILSFLHPDVF TSSEPFDKAF NLNTSEHKVD SNLLEKAHFL MRPFILRRVK GEVEVSLPPK
TETKIMCPLS EAQTFWYRRL LLREATALQS LEKATKGEGG ADNFQKLNSL LMQLRKCCNH
PFLFTGTDVP EDGVPIEDLI SASGKLAVLD RMLQKLKEGG HRVVLFSQFT SMLDILQDFL
TLRGYTYARL DGSTNRVQRS IDIAAFNRPD SPMFAFLLST RAGGLGVNLQ TADTCILFDS
DWNPQVDLQA MARVHRIGQK KMVHIYRLVT AGTVEERMTQ RAEKKLFLDQ MVSRGSTKAA
EQSDNLDRND LYAMLRFGVD AVFSKASGDP PTDEELDILM DR