| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_38826 |
|---|
| Symbol | |
|---|
| ID | 5002017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009359 |
|---|
| Strand | - |
|---|
| Start bp | 746941 |
|---|
| End bp | 747789 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | 640417438 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001418099 |
|---|
| Protein GI | 145347275 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3000] Sterol desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.914013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGCGA AAGTTTGGCG CGTCGTGCTG GATAACTTTC ACCCGTTCGT CATCGCGGGT
CCGCTGACGT TCGCGTACCA CGAGGCGGTG TACTTCGGCG CGTGGACGCC GTGGTTGGCG
ATGGATCAGT TTGAATACTT TAAGCGATGG AAGATACAGC CGGATAAAAC GCCGAGCAAG
GAAATGGTGA TGAAGTGCCT GACGAAGCTT TTGAAGTCGC ACGTGTTCAT TCAGTTGCCG
ATGCAAATGA TGTTTTATTT CGTGGCGCCG TACTTTGGAT TTTCGCTGGC GATGGAGGCG
TTGCCGAAAT CGAGGGATTT GTTGTGGCAG ATTCCGGTGT TTTTCGCGAT TGAAGATTTC
TACTTTTACT GGGTTCACAG GGGATTGCAC CATAAGCGGG TGTACAAGTA CGTGCACAAG
ATTCATCACG AGCACAAATT TCCGTTCGGC ATCGCCGCCG AGTACGCGCA CCCGGTGGAG
ACGTTCTTTT TGGGCATCGG CACGTTGCTC GGGCCGTTGT TTTTCGCCAA GCACATGGTG
ACGCTGTGGG TTTGGTTGTT TTTCAGGCTC GTGGAAACGG TGGAGGATCA CTCTGGCTAC
GACGTGCCGT GGAATCCCAC AAATTTGATT CCATTTTGGG GTGGCGCGGT GCACCACGAT
TTCCATCACA AGACGTTCGA AGGGCCGTAC TCGAGCGTTT TCACGTGGTG CGACTGGATG
TTTGGCACGG ATAAGGAATT TAGAAAGCAT CAACTCAAGC TTAGAGGTGG GAGTGAGTCT
TTGGCGTACC CAGCCGTGTT CCGAGGCGCG CCGAACGAGC GCTCCTTGCC TTCCAAGAAG
GTGGATTAG
|
|---|
| Protein sequence | MFAKVWRVVL DNFHPFVIAG PLTFAYHEAV YFGAWTPWLA MDQFEYFKRW KIQPDKTPSK
EMVMKCLTKL LKSHVFIQLP MQMMFYFVAP YFGFSLAMEA LPKSRDLLWQ IPVFFAIEDF
YFYWVHRGLH HKRVYKYVHK IHHEHKFPFG IAAEYAHPVE TFFLGIGTLL GPLFFAKHMV
TLWVWLFFRL VETVEDHSGY DVPWNPTNLI PFWGGAVHHD FHHKTFEGPY SSVFTWCDWM
FGTDKEFRKH QLKLRGGSES LAYPAVFRGA PNERSLPSKK VD
|
|---|
| |