| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_37993 |
|---|
| Symbol | |
|---|
| ID | 5003948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009364 |
|---|
| Strand | + |
|---|
| Start bp | 586719 |
|---|
| End bp | 587744 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | |
|---|
| GC content | 61% |
|---|
| IMG OID | 640419369 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420043 |
|---|
| Protein GI | 145351349 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.144035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGTA AGCAATGCAA GGTTGCCATC AACGGTTTCG GCCGCATCGG CCGCAACTTC
TTGCGATGCT GGCACGGACG CGCCAACACC ATGCTCGACA TCGTCGCCAT CAACGACTCG
GGCGGAGTGA AGCAAGCGAG CCACTTGGTC AAGTACGACT CCGTCCTCGG CACGTTCGAG
GCGGATGTCA AGATCATCGA CGACACGCAC ATCTCCATCG ACGGCAAGTC CATCGAGATT
GTGTCTTCCC GTGACCCGCT CCAGTTGCCG TGGAAGGCTC TCGGCGTCGA CATCGTCATT
GAAGGTACCG GCGTCTTCAT CGACACCCCG GGCGCCTCCA AGCACTTGAC CGCGGGCGCC
AAGAAGGTTG TCATCACGGC CCCGGCCAAG GGTGACGACA TCCCGACCTA CGTCCTCGGT
GTCAACGCCG ACCAGTACAA GAACACCGAC AAGATCGTCT CCAACGCGTC GTGCACGACC
AACGGCCTCG CGCCGTTCGT CAAGGTTCTC GACGACCGAT TCGGCATCGT CAAGGGTTTG
ATGACCACCA CGCACTCCTA CACCGGTGAC CAGCGCATTT TGGATGCGTC TCACCGTGAC
TTGCGCCGCG CTCGCGCCGC CGCCTTGAAC ATCGTGCCGA CCTCCACCGG CGCCGCCAAG
GCTGTCGCGC TCGTCTTGCC GCAACTCAAG GGCAAGCTCA ACGGCATCGC GCTCCGCGTC
CCGACGCCGA ACGTGTCCGT CGTCGATCTC GTCATCCAAA CCTCCAAGAA GGTCACCGCC
GACGAAGTCA ACGCCGCGTT CCGTGAAGAA GCCGCCGGCA AGCTCAAGGG TATCCTCGCC
GTCGCCGACG AGCCGCTCGT GTCTTGCGAT TTCAAGTGCT CCGACGTCTC CACGTCCATC
GACGCCGCGC TCACCATGGT CATGGGTGAC GACATGTTGA AGGTTGTCGC GTGGTATGAC
AACGAGTGGG GCTATTCGCA ACGCGTAGTG GACTTGGCGG AATTATGCGC AGCAAACTGG
GAATGA
|
|---|
| Protein sequence | MKGKQCKVAI NGFGRIGRNF LRCWHGRANT MLDIVAINDS GGVKQASHLV KYDSVLGTFE
ADVKIIDDTH ISIDGKSIEI VSSRDPLQLP WKALGVDIVI EGTGVFIDTP GASKHLTAGA
KKVVITAPAK GDDIPTYVLG VNADQYKNTD KIVSNASCTT NGLAPFVKVL DDRFGIVKGL
MTTTHSYTGD QRILDASHRD LRRARAAALN IVPTSTGAAK AVALVLPQLK GKLNGIALRV
PTPNVSVVDL VIQTSKKVTA DEVNAAFREE AAGKLKGILA VADEPLVSCD FKCSDVSTSI
DAALTMVMGD DMLKVVAWYD NEWGYSQRVV DLAELCAANW E
|
|---|
| |