| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_37824 |
|---|
| Symbol | |
|---|
| ID | 5006106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009370 |
|---|
| Strand | - |
|---|
| Start bp | 418857 |
|---|
| End bp | 419771 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | 640421527 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422066 |
|---|
| Protein GI | 145355640 |
|---|
| COG category | [A] RNA processing and modification |
|---|
| COG ID | [COG5239] mRNA deadenylase, exonuclease subunit and related nucleases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.725866 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAAA ACGCCGCCGC GGCGACGAGC GTTCGAGTCG TCACATACAA CATCCTCGCG
CAAGTATACG CCAAGAGCGC GTGGTTTCCG TGGACGCCGC GCGCGCTGAT GAAGTCGAAA
GCGCGCCGCG CGAATGTACA GAAAAAACTA CTCGCGCTCG ACGCCGACTT AATGGCGCTT
CAAGAGCTCG ATGGGTACGA GCCGAGCGAA GAGAACGACG CGCGATGGAA GTCTTGGTTG
CGCGAACACG GGTACGAGTC GCGGTACGTG CAGCGGACGA AGAAGAGTAA CGCGAAAAAG
GATGGAAGCT GCGTGGCGTG GCGCGCGTCG ACGTTCGCTT TGGAAGATTC GCGGAATTTG
GAATACAACG ATATCGGCTA CGATTTGTAC GGCCGAGACG ATGCGAACGA CGAAACGAAC
GAAAACGAGG CGCGTCGACG GTACTTGCGA GACTGCGTGG GGAATTTAAC GCTGCTTCGG
CGAATCAAAG ACGGCGCGCT CGTCGTCTTC GCGTCGACTC ACCTGTACTG GGATCCGGAA
TGTGCCGACG TAAAGCTCGC GCAGGCGAAA ATGTTGATCG CCGAGTGCGT CAAGTTTCGC
GACGAGGCGC TAATTCGAGC CGAAGGGCGT CCCGTGCACG TCATCATCGG CGGCGATTTC
AACTCGGATC CGCAAAGCGA CGTGTACGGC GCGATGAACG CGGCTTTCAC GTCTGTCTCG
AATGGACGAG AACCACAGTT CACGAACGTC ACGCCGAGTT TCACTGCGTG CATTGATTAT
GTGTTTCTGT CATCCGGTGT TCGTGTCGTC GCCGTGGATG AACAGCCCGC GCGAGACACT
CTCGGCGAAG GCTTGCCGAA CACCGGACAC CCGAGCGACC ATCTTCCAGT CGCTGCGAAG
ATTGAATTCG ATTAA
|
|---|
| Protein sequence | MAQNAAAATS VRVVTYNILA QVYAKSAWFP WTPRALMKSK ARRANVQKKL LALDADLMAL
QELDGYEPSE ENDARWKSWL REHGYESRYV QRTKKSNAKK DGSCVAWRAS TFALEDSRNL
EYNDIGYDLY GRDDANDETN ENEARRRYLR DCVGNLTLLR RIKDGALVVF ASTHLYWDPE
CADVKLAQAK MLIAECVKFR DEALIRAEGR PVHVIIGGDF NSDPQSDVYG AMNAAFTSVS
NGREPQFTNV TPSFTACIDY VFLSSGVRVV AVDEQPARDT LGEGLPNTGH PSDHLPVAAK
IEFD
|
|---|
| |