| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_36629 |
|---|
| Symbol | |
|---|
| ID | 5006992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009375 |
|---|
| Strand | - |
|---|
| Start bp | 237131 |
|---|
| End bp | 239233 |
|---|
| Gene Length | 2103 bp |
|---|
| Protein Length | 700 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | 640422413 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422934 |
|---|
| Protein GI | 145357455 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 0.562122 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00135175 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCGC GAGGTGAACG AGGGAACGCG CACGACGGCT ATCACGACAT CCAGAAGACG
AACAAAGCGT TTGAGACGTA CTACAAAGCC CAGAATATCG TCCCGGAGAG CGAGTGGGAG
ACGTTTTTGG ACTGCATGCG GTCGCCGTTG CCGATGACGT TTAGAATCAA TGGAAGTGGA
AAGTTCGCGA CGGATATGCG AGACCAATTG GAGGGGACAC TGTTCGCGGA ATTGCTCAAA
GAGGAATTGA AAGATGAGGA ACAAAATGAA TTACCGCCGC CGAAGCCGTT GGCGTGGTAT
CCCGAGCGAT TGGCGTGGCA GTGTAGTTAT ACGCGAGCGC AGTTGCGACG GTTGCCGGCG
CTGCAAGGAA TTTTCGACTT CATCAAGAAC GCTAACGAGC TCGGGTCGAT CTCTAGGCAA
GAGGCAGTAT CGATGATTCC TCCGTTTTTC TTGGATGCGC AACCGCATCA TCGAATTTTG
GACATGTGCG CGTCGCCGGG AAGCAAGACG TTTCAGATTT TGGAACGCAT GCACGGTGAT
TTTGACGGCA ACACCAAGCT TCCCACCGGA ATCGTCGTCG CCAATGACGT CGATTTGAAG
CGTTGCAACT TACTGACGCA TCAAACGAAG CGAGCGAACT CACCGACGTT ACTCGTGACC
AATCATGAAG CGCAAAACTA TCCCATCATC AAAGGCCCAA AGGGTGAACT CTTCGACTTT
GACGCCATCC TGTGCGACGT ACCGTGCTCG GGCGACGCGA CGATGCGCAA GGCACCGGAT
ATCTGGAACA GATGGACTCC TGGTAATGGT AACGGTTTGC ATACCTTACA GCTTAGAATC
GCTGCTCGCG GTGCTCAGCT CCTCAAGGTG GGCGGTCGTC TCGTGTACAG CACGTGCTCG
CTGAATCCGA TTGAAAACGA AGCTGTCGTG GCGGCGTTGT TGAAGGAATG CGATGGTGCT
TTGGAGCTTC TCGATGTGAG TGACGAATTG CCAGACTTGA AGCGTAGCCC TGGATTGCGC
GATTGGCAAG TGTGGGATAA GTTTGGCTAT CACCCAAGCT TTCGAGGCGA GGAGCAAATG
TTCAAGCTCT GCGAGACGAT GTTCTCCGAC GAAGAGACGA AGAAACTGCC GTTGGAGCGA
TGTCTGCGAC TTTTGCCTCA TCATCAAGAC ACTGGTGGAT TCTTTGTCGC CGTATTCCAG
AAAGTTAAGC CCATGGAGAT CAAAGAAGAC GTGAACGCAA AGAAGCAAAC TGTGAAGGAG
CGTGTTCGCC TTTCGCTCAA CGTGAACGCG AAGAACGAGA TCGAGATGTC ACATGAGGTG
ATCACGTTGG CCCGCAAGGG TCAGACTGCG TCTATACCTC CGGAAGTCGA CGACAAAGGC
GAGTATTTGC TCCCACACAG AGGCGCGACG GGTCCGAACG GGGGCAGTCG ATGGCTCGGC
ATCGATCCTG TGCTTCCGGT GAACGATCCG AAGGTGATCA ATAGCATCTA CAGTGTCTAC
GGTATCGAAA GCGATGACAT TGCGTTACAC AAAAATTGTG TCACACGCAC TGCGGACACT
TCACGACCGA AGCGTGTGTA CACCATCACC GACTCCTTGC GCCAGTACTT AGCGTGCGAC
GTCAACGAAA GTCTTCGCGT GACGTCGTGC GGGCTCAAGG CGTTCGAGCG CCAGGAAATC
AAGGATGAAG TCAAAGAACA AGAAGAAACT TCTGGTGCGA TGTGTGATTT CCGTCTCACG
CAAGACGGAA TACCGATGAT GTTCCCGTTC GTGAGAAAGC GCATCATTCG CCCGACTTTT
GACGACTTTA AAGCCATCCT TGAACGTCGC ACGTTGGCGT TTGAGTACAG CGCAGAGGCG
CCGCAACGCG CCGTCATCTC TTGCGCCGAA ACCAAAAAAG CCTTGCTCGA TCTCACTTTG
GGATGCTGCA TTCTCGTTCC TCGCGATGAA GATCTGGCCG CCATCAACGT CAGCAAGGCG
GACCTCGCCA TCGCGTGCTG GCGCGGTCGC ACGTCATGCA ACTTGTTGGT CTCCAAAGCC
GAAACAATTC ACTTCATCGA TAAAATCAAA GTCAACGCGG CGGTGAAGAT GGACACGTCG
TGA
|
|---|
| Protein sequence | MDARGERGNA HDGYHDIQKT NKAFETYYKA QNIVPESEWE TFLDCMRSPL PMTFRINGSG
KFATDMRDQL EGTLFAELLK EELKDEEQNE LPPPKPLAWY PERLAWQCSY TRAQLRRLPA
LQGIFDFIKN ANELGSISRQ EAVSMIPPFF LDAQPHHRIL DMCASPGSKT FQILERMHGD
FDGNTKLPTG IVVANDVDLK RCNLLTHQTK RANSPTLLVT NHEAQNYPII KGPKGELFDF
DAILCDVPCS GDATMRKAPD IWNRWTPGNG NGLHTLQLRI AARGAQLLKV GGRLVYSTCS
LNPIENEAVV AALLKECDGA LELLDVSDEL PDLKRSPGLR DWQVWDKFGY HPSFRGEEQM
FKLCETMFSD EETKKLPLER CLRLLPHHQD TGGFFVAVFQ KVKPMEIKED VNAKKQTVKE
RVRLSLNVNA KNEIEMSHEV ITLARKGQTA SIPPEVDDKG EYLLPHRGAT GPNGGSRWLG
IDPVLPVNDP KVINSIYSVY GIESDDIALH KNCVTRTADT SRPKRVYTIT DSLRQYLACD
VNESLRVTSC GLKAFERQEI KDEVKEQEET SGAMCDFRLT QDGIPMMFPF VRKRIIRPTF
DDFKAILERR TLAFEYSAEA PQRAVISCAE TKKALLDLTL GCCILVPRDE DLAAINVSKA
DLAIACWRGR TSCNLLVSKA ETIHFIDKIK VNAAVKMDTS
|
|---|
| |