| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_34867 |
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| Symbol | |
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| ID | 5003729 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009363 |
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| Strand | - |
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| Start bp | 155396 |
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| End bp | 157444 |
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| Gene Length | 2049 bp |
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| Protein Length | 652 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | 640419150 |
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| Product | predicted protein |
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| Protein accession | XP_001419728 |
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| Protein GI | 145350681 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.437532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCACG CGCCGTCGTC GGCATCGTGG CGCGAGAACG ACGCGATCGA GCACGTGGAG
GAGCGACTCG TCGGCCTCGA GCTCTACGCC AACGCCGCCG CCGGATTCGA TGGTGTGCTG
AAAGAACGCT ACAGCGATTT CATCGTGCGG GAGATCGACA TCGAGAGCGG TGAGGCGGTG
GTTTTGAATG AACTGAGCGC GACGTGCGAT GTAGAGATCG ACGCGCGAGA GCGGAAGAAG
TTTGAGGCGA TGAAGGCGAA AGTGCAAGCC ATGGAACGCG AGCGCGGGCC GGACGACGAA
GCGGAGGACG AGGACGCGGC GAAGGATGAC GTGGAGGGGG ATAAAGAAGA GAGTATTGAG
GAGGCAATGA AAGAATTCGA AGCGCTGTGC GGTGCAGAGG ACGCGCGGCG ACTGAGAGAA
TTTTTAGCCA CTCCCGGGGT GACGCGTCGA AGTCAGAAGA CGCACGATGG AAAGGCGGAA
ACGCCCCAAC CGCTCGTGCT CGAGCCGACG ACGGATAAAG CGAAACGGAC GCAAATTCAT
CAATTTTTCA AGAAACACTT TTTATTACCT ACGGACAACG TCGTGGAGTC GAACGAGGAA
GAGAAGGAAG CTCTCAAGAA CTTGAAAAAG CCGTCTTCGA GCGTGCGCGT GCATGCCGCC
GTCAAGCAAG GCAAGAAGCG AACGCGCGTG GAGGCAATGG ATCATCGAGC GGTGGGAAAC
TTTTGGCCCG AAGGCGTTCC AGAACATGTG CGATTTGCGT TTTGCAAAGA AAACAAAGAG
TCTTACGAGA TGCTCAACGT CATAGCCCGG GCCTTGAAGG TGAACTTCAA GTCTATTGGC
GTCGCCGGAA CGAAGGACAA GCGCGGAGTG ACAACGCAAC ACGTCACCGT GCACAGAGTT
CGGGCGAAAA GGTTGGCCAA GCTGGTACTT TATGGGTGTA AAATTGGTAA CTATACGTAT
GTCGACAGAC AACTTGGTTT CGGAGACCAT TGCGGGAACG AGTTTGAGAT AACGCTCCGA
GGCATCGACC CAGACGTCGT CGGGAACGTG GAGGAGGCAG TGCGCGCACT CAAGTCTTCA
GGGACCATCA ACTACTACGG TTTGCAGAGA TTTGGTAGCG CTGGGGGCAA ACACGCAACG
CATAAAATTG GAATTGAACT TTTACGTGGC GAATGGCAAG CTGCGATCGA CGCTTTGCTG
CTGCCGCGCG AAGGCGAGCG CGACGATGTC ATGAAGGCGC GCTTGAAATG GATGGAAACA
AAGGATCCCA ATGAGACTTT GAAGTTGATG CCACGCTGGT GCGCGGCAGA GCGCTGTGTG
CTCGAGCGCA TGTCAAAAGT TCGCTCCACG GACTTGGTCG GATCGCTGTT GGCCGTGCCG
AAGCAGATTA GACTGATGTA CATTCACGCC TACCAGGCAT ACTTGTTTAA TCGTGTCGTG
TCGGAGCGCA TTCGTAAGTA CGGAGTCAAC ACGGTCGTCG AAGGTGACTT AGTGCTCGAA
GAGGGAAACT GTGCCGGAGA TGAAGGCGAA GACGATATGA ATGGCGATAC TCGGGTGAGT
ATGCCGAGGG TTCGCGTAGT GACAGCCGAG GAAGCCGCTT TGGGTGCGAT TGACTCGTCG
CTCGTGGTGC TGCCGCTTCC TGGAAACTCG ATAACGTACC CAACAAATTT GGGTGATGTT
TACGATCGAT TCGCCGCGGA GGATGGAATC AGTTTGAATA CTACGACGCA TTCGGTTCGT
GAATTCGCAA TCAACTCATT CACCGGTGAC TACCGTAGAT GCTTTCTCAA ACCCACAAAC
GTATCGCACA CCGTCATTTC GTACGCGGAC GCGGCGGCGG ATTTGGTTTT GACCGATCTC
GATCGCATCA ATGGCATCAC CGAACGCACC ATCGAAGACG GCCCTTTACG TGCCGTAACG
GTGAAGTTCA CTCTGCCCCC GTCTTCTTAC GCCACCATGG TTCTTCGGGA GTTGATGAAG
GCGAACACCT CGGTGAGCTC GCACAAGCGC AAGACGCTCG ACGCGCGAGC GGCGGCTTCC
GTAGAGTAG
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| Protein sequence | MSHAPSSASW RENDAIEHVE ERLVGLELYA NAAAGFDGVL KERYSDFIVR EIDIESGEAV
VLNELSATCD VEIDARERKK FEAMKAKSIE EAMKEFEALC GAEDARRLRE FLATPGVTRR
SQKTHDGKAE TPQPLVLEPT TDKAKRTQIH QFFKKHFLLP TDNVVESNEE EKEALKNLKK
PSSSVRVHAA VKQGKKRTRV EAMDHRAVGN FWPEGVPEHV RFAFCKENKE SYEMLNVIAR
ALKVNFKSIG VAGTKDKRGV TTQHVTVHRV RAKRLAKLVL YGCKIGNYTY VDRQLGFGDH
CGNEFEITLR GIDPDVVGNV EEAVRALKSS GTINYYGLQR FGSAGGKHAT HKIGIELLRG
EWQAAIDALL LPREGERDDV MKARLKWMET KDPNETLKLM PRWCAAERCV LERMSKVRST
DLVGSLLAVP KQIRLMYIHA YQAYLFNRVV SERIRKYGVN TVVEGDLVLE EGNCAGDEGE
DDMNGDTRVS MPRVRVVTAE EAALGAIDSS LVVLPLPGNS ITYPTNLGDV YDRFAAEDGI
SLNTTTHSVR EFAINSFTGD YRRCFLKPTN VSHTVISYAD AAADLVLTDL DRINGITERT
IEDGPLRAVT VKFTLPPSSY ATMVLRELMK ANTSVSSHKR KTLDARAAAS VE
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