| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_33832 |
|---|
| Symbol | |
|---|
| ID | 5000870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009357 |
|---|
| Strand | + |
|---|
| Start bp | 461962 |
|---|
| End bp | 465132 |
|---|
| Gene Length | 3171 bp |
|---|
| Protein Length | 1056 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | 640416291 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001416669 |
|---|
| Protein GI | 145344290 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0525] Valyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.828638 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAGGG CGACGATCGA TCCGGAGAAG GCGGCGAAGA AGGCGGCGAA GCTGGCGGAG
AAGGAGGCGA AGAGGGCGAA GGCGGCGGCG AAGGCGGCGA AGGCGGCGGA GGAAAAGGCG
AAGAGGGACG CGGGCGGCGG CGGCGAGGGC AAGGCGAAGA GGGAGAAGAA GGCGAGCGGG
CCGAGCGAGG AGGACGTGCG AGCGCTGGAG AGCGCGCTGA AAACGCCGAG GGGGGAGATG
AAGGATTTGG TGGGGACGCC GATGGCGAAG TCGTATAATC CGGTGGCGGT GGAGGCGGCG
TGGTACGACT GGTGGGAACG GTGCGGGATG TTTACGCCGA CGATGGGGAC GAATAAGCCA
AAGTTTGTCA TCGTGATTCC GCCGCCGAAC GTCACGGGTG CGTTGCACAT TGGACACGCG
CTGACGAACG CTATTCAAGA CACCATCGTG CGGTGGCGAC GAATGCAGGG ATATGAAGCG
CTGTGGGTTC CGGGGACGGA TCACGCGGGC ATCGCGACGC AAACCGTGGT GGAGAAGAAA
TTGCAGCGCG AGGAAGGCGT CACGAGGCAC GATCTCGGGC GAGAAAAGTT CCTCGAGCGC
GTGTTCGAGT GGAAAGACGT GTATGGGGGC AAGATCTGCA ATCAGCTTCG CCGAATCGGC
TCTTCTATGG ACTGGACTCG AGAGGCGTTC ACGATGGATG AAAAGTTGAG CAAAGCCGTC
AAGGAAGCCT TCGTGCGCAT GTTCGACGAA GGTTTGATTT ATCGCGACAA TAGATTGGTG
AACTGGAGTT GTCAGTTGAA GACTGCGATC AGTGATATCG AGGTGGATTA CATCGAGCTC
GATGGGCCGA CGATGCTCGC GGTGCCGGGG CACACCAAAA AGGTGGAGTT CGGCGTCATC
ACATCCTTTG CGTACCCGTT CGAAGACGGG CAAGGCGAAG TTGTCGTGGC GACGACGCGT
ATTGAGACCA TGCTTGGTGA CACCGCTGTT GCGGTGCACC CCGAAGACGA ACGCTACAAG
AGCTTACACG GAAAATTCGT TCTTCACCCG TTCAACGGTC GTCGTATTCC CATCATTTGC
GACGCCGAAC TTGTCGACAT GGAATTCGGT ACAGGTTGCG TGAAGATCAC CCCAGCCCAC
GATCCGAACG ATTTCAACAC CGGTAAGCGT CACGATCTTG AGTTTATCAA CGTATTCACC
GAGGAAGGAT TGGTGAACGA GCAAGGCGGC GAGCAATTCC AGGGCATGAA GCGCTTTGAG
TGCCGCGTCG CCATCACGGA GGCGCTCGAC AAGCTTGGTC TTTACCGGGG CAAGGCGAAC
AACCCGATGC GTTTGGGTCT TTGTAGCCGT AGTAAGGATG TCATCGAACC GATGCTCAAG
CCGCAGTGGT GGGTCAATTG CCAAGACATG GCAAAGGAGG CGTGCGATGC CGCTCGCGAC
AAGCGACTTG AAATTCTCCC TACTTTCATG GAACCGACGT GGTTCAGATG GTTGGAGAAC
ATTCGTGACT GGTGCATCTC CCGTCAACTT TGGTGGGGTC ATCGTATTCC AGCCTTCTAC
GTTCGTTTCG CCGGCGAAGG TGACGACGAC TGTGGGATGC CAGGCGGTAG CTCTGAGAAG
ATGGATCGAT GGGTCATCGG TCGTGACGCC GATGAAGCGC GCGTTTCGGC CGAGAAGAAG
TTCCCGGGTC GAGAATTCAC ACTCGAACAA GACGAAGACG TGCTCGACAC TTGGTTCTCG
TCCGGTTTGT TTCCGTTTTC CGTCTTTGGC TGGCCCGACG AGACACCGGA TTTGGCCGAG
TTTTACCCAA CGTCCCTCCT CGAAACTGGA CACGACATTT TGTTCTTCTG GGTCGCTCGT
ATGGTAATGA TGGGCATGAA ATTGACTGGT AAGGTGCCGT TCAAACAAGT GTACCTGCAC
GCCATGGTTC GTGACGCGCA TGGTCGTAAA ATGTCAAAGT CTCTCGGTAA CGTCATCGAT
CCTCTCCATG TCATTGAAGG TATCGACTTG GCCGCCCTCA ACGAGACTCT CGTCGGCGGT
AACCTCGACG AGAAGGAACG CAAAAAGGCG CAAGCGGGTC AAAAGGCTGA CTTCCCCGAT
GGCATTCCAG AATGTGGGAC CGATGCTATG CGCTTCGCGC TCGTGTCTTA CACCGCTCAA
GGTCGTGACA TCAACCTGGA CGTTCTCCGT GTCGTTTCGT ACCGCCACTG GTGTAATAAG
CTTTGGAACG CGACTAAGTT TGCGATGATG AATTTGGGTG ACGAATACGT GCCGCCGGCC
GATTTCAACG CTACTTTCGA TGTACAAAGT CTTCCGCTCG CGGCCAAGTG GGTTCTCAGC
CGCTTGAATG CAACATGCGC GTCGACAAAC GCGGGTATGG AAGTGTACGA TTTTAACACC
GCCACGAACT CTGTGTACGC GTTCTGGCAA TACGAACTCT GTGACGTTTA CATCGAGATC
ATCAAGCCTG TTATGAGTGG ATCGGATGAA ATGGCGAAGA AACAACTGCG AGATGCGCTT
TGGATTTGCC TCGACGCTGG TTTGAGACTT CTCCACCCGT TCATGCCCTT CGTCACCGAA
GAGCTCTGGC AGCGACTTCC GCGCACTCGC AATGAGAACA CACCGAAGAG TATTATGATT
GCTGAGTACC CAGTCGCGGT CGATTCTTGG GCCAACGCCA CGGCTGAGTC GCAGATGCAA
ATCATAATGG ACTCTGTTAA GGCGTTCCGA TCGTTGAAGT CCAACTACAA CCTTCCTCCC
AGAGCGAGAC CGGATGTTTT CTACAGTGTC AAGACGGATG ACAGCGAAGC GGCGATGAAG
ATTGATCCAG AAGGTTTGGT CTCTCTCGCG GGCGTCGGTG AGTTGAAACA GCTGGCTCAA
GGTGAATCTG CGCCGCCGGG TTGCGCGGTG AGCATCGTGA ACGAGTCCGT GACGGTCTAT
GTTCTCTTGA AGGGAATCGT CGACGCCGCG ACGGAAATTG CCAAGCTCGA TAAGAAGCTT
GATTTGCTCA CCAAATCGAC AGAAGCGCTC GTCAAAAAGA CGCAAGAAGA TGGCTACGAG
ACCAAGGTTC CGGAGAAGGT TCGCAACGAA AACGCCGACA AGATCGCTAA GCAAGCTGAA
GAAATTGATT CCATCAAGGC CGCACGTGCG GACTTTGAAG CGTTGCTGTA G
|
|---|
| Protein sequence | MERATIDPEK AAKKAAKLAE KEAKRAKAAA KAAKAAEEKA KRDAGGGGEG KAKREKKASG
PSEEDVRALE SALKTPRGEM KDLVGTPMAK SYNPVAVEAA WYDWWERCGM FTPTMGTNKP
KFVIVIPPPN VTGALHIGHA LTNAIQDTIV RWRRMQGYEA LWVPGTDHAG IATQTVVEKK
LQREEGVTRH DLGREKFLER VFEWKDVYGG KICNQLRRIG SSMDWTREAF TMDEKLSKAV
KEAFVRMFDE GLIYRDNRLV NWSCQLKTAI SDIEVDYIEL DGPTMLAVPG HTKKVEFGVI
TSFAYPFEDG QGEVVVATTR IETMLGDTAV AVHPEDERYK SLHGKFVLHP FNGRRIPIIC
DAELVDMEFG TGCVKITPAH DPNDFNTGKR HDLEFINVFT EEGLVNEQGG EQFQGMKRFE
CRVAITEALD KLGLYRGKAN NPMRLGLCSR SKDVIEPMLK PQWWVNCQDM AKEACDAARD
KRLEILPTFM EPTWFRWLEN IRDWCISRQL WWGHRIPAFY VRFAGEGDDD CGMPGGSSEK
MDRWVIGRDA DEARVSAEKK FPGREFTLEQ DEDVLDTWFS SGLFPFSVFG WPDETPDLAE
FYPTSLLETG HDILFFWVAR MVMMGMKLTG KVPFKQVYLH AMVRDAHGRK MSKSLGNVID
PLHVIEGIDL AALNETLVGG NLDEKERKKA QAGQKADFPD GIPECGTDAM RFALVSYTAQ
GRDINLDVLR VVSYRHWCNK LWNATKFAMM NLGDEYVPPA DFNATFDVQS LPLAAKWVLS
RLNATCASTN AGMEVYDFNT ATNSVYAFWQ YELCDVYIEI IKPVMSGSDE MAKKQLRDAL
WICLDAGLRL LHPFMPFVTE ELWQRLPRTR NENTPKSIMI AEYPVAVDSW ANATAESQMQ
IIMDSVKAFR SLKSNYNLPP RARPDVFYSV KTDDSEAAMK IDPEGLVSLA GVGELKQLAQ
GESAPPGCAV SIVNESVTVY VLLKGIVDAA TEIAKLDKKL DLLTKSTEAL VKKTQEDGYE
TKVPEKVRNE NADKIAKQAE EIDSIKAARA DFEALL
|
|---|
| |