Gene OSTLU_33328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_33328 
Symbol 
ID5003625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009363 
Strand
Start bp41025 
End bp42242 
Gene Length1218 bp 
Protein Length405 aa 
Translation table 
GC content57% 
IMG OID640419046 
Productpredicted protein 
Protein accessionXP_001419688 
Protein GI145350596 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCGA AAAAGAAAAC CGCCGACGAC GGCGCCGACG ACGTCGGCGC GGCCAAGTTC 
GGTCGCGTGC GAAACAACCT TCGCATGGGC ATCGTCGGCC TGCCCAACGT CGGCAAGTCG
AGCCTGTTTA ACATCTTGAC CGAGCAATCC ATCGCGGCGG AGAACTATCC ATTCTGCACC
ATCGACCCGA ATGAAGCGCG GTGCCCGGTC CCTGACGCGC GATACGATCG ATTAGTCTCC
ATGTGGAAGC CCGCGAGCGA GTATCCAGCG TTTCTGAGCG TGACCGACAT CGCGGGCTTG
GTGCGAGGCG CGTCTTCGGG CGCTGGCTTG GGGAACGCGT TCTTGAGCAA CATCATGGCG
ACGGATGGCA TATTTCACGT GGTGCGAGCG TTCGACGACC CGGAGGTGGT GCACGTGGAT
GATGAGATCG ATCCGGTGCG TGATTTGGAA ACCATCACCG CGGAACTGTG CTTGAAGGAT
TTGGAGACGG TGAAGCGGGC GATCGCGGAC GAGGAGCGAG ACGTCAAGAA GAACCCGACG
ATGAAACTCT CGGCGTTGTT CAAGGACACG ATGGCGCGGT GCACGGAAAT GTTAGAAAAT
AACTTGGCGA TTCGAACCGG AGAGTGGAAC ACGCCGGAGG TGGAGATGAT TAAAGACAAA
CTGCCCGCGT TGTTGACCAC CAAACCGATG ATTTATCTCG TCAACCTGAG TAAACGGGAC
TACGTACGCA AAAAGAACAA GTGGCTGCCG AAGATTCACG CCTGGGTGCA GCAACATGGC
GGCGGTATCA TGATTCCGTT TTCCGTCGAA TTTGAACAAG AGCTGTTCGA TTTGGGCGAC
GACGAGTCGC TGCGCTCGGC GTTTTACGAA GAAAACGAAG GCGCGAAATC GGCGTTGCCA
AAGATGGTGA CGCAAGGGTA CAAGGAACTG AATCTCATGT ACTTCTTCAC CGCGGGCGAG
AAGGAAGTGC GATGCTGGAC CGTGTACAAC GGTGCTCTCG CTCCTCAAGC CGCTGGCGTC
ATTCACACCG ATTTCGAGAA GGGCTTCATC AAGGCTGAAG TGTGTTCGTA CGACGACTTC
GCCGCAATCG CCACCAAGCC TTCGATGGCT GAGGTGAAAG AGGCGGGCAA GTACCGCCAA
GAGGGCAAGG CGTACGTCGT CAAAGACGGC GACATCATCC ACTTCCAAAT CGGCCAGCTC
ACGAAATCGA AGAAATAG
 
Protein sequence
MPPKKKTADD GADDVGAAKF GRVRNNLRMG IVGLPNVGKS SLFNILTEQS IAAENYPFCT 
IDPNEARCPV PDARYDRLVS MWKPASEYPA FLSVTDIAGL VRGASSGAGL GNAFLSNIMA
TDGIFHVVRA FDDPEVVHVD DEIDPVRDLE TITAELCLKD LETVKRAIAD EERDVKKNPT
MKLSALFKDT MARCTEMLEN NLAIRTGEWN TPEVEMIKDK LPALLTTKPM IYLVNLSKRD
YVRKKNKWLP KIHAWVQQHG GGIMIPFSVE FEQELFDLGD DESLRSAFYE ENEGAKSALP
KMVTQGYKEL NLMYFFTAGE KEVRCWTVYN GALAPQAAGV IHTDFEKGFI KAEVCSYDDF
AAIATKPSMA EVKEAGKYRQ EGKAYVVKDG DIIHFQIGQL TKSKK