Gene OSTLU_32956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_32956 
Symbol 
ID5003364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009362 
Strand
Start bp139165 
End bp140442 
Gene Length1278 bp 
Protein Length409 aa 
Translation table 
GC content61% 
IMG OID640418785 
Productpredicted protein 
Protein accessionXP_001419292 
Protein GI145349752 
COG category[S] Function unknown 
COG ID[COG5373] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0445544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.24462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CGCGACGCGT CGCGCATCGC CGCCGAGCGC ACGAAAACGC GCGCACACAT GGACGCGCCC 
ACGCCCGACG CCCCCGCGGC GACCGCGCCG ACGCCCGCGC CGGCGTCGCC GAGCGTGAAA
CCGAAACGCG AACGTAAAAA AGTTGAAGTG TTTCAAGTCG TCGACGACGC GCCGAAGAAA
TCGCTCGACG TCAAGCCGGG ACGCGGGACG AAGCTGTGCG AGATCCCGAA CGTGGCGTTC
AAGCTGTCGA AGATCCCGCG CAAGGAGGAG CTGTTGAAGT TTGTGTATCG CATCCTGTAC
AAGGGGGTGG GCAAGCAACA AACCATCAAG CGGGACATCG GCGAGTTCTC GGGATGGACG
TTCGAAAACG ACGGCGAGCG CGCGGTGAAG GAAGATTTGC TGTCGAGGGC GTTTAAAGAC
ACGCTGCACG ATCTTCTGGA CTTGTTCGAG CTGCCGCGAG GAAGCGGGGC GGAAGGGAAG
AAGGAGGCGC AGGTGGCGCG TTTGATGACG TGGTTGGACG CGCCGAAGGC GAGCGGGAAA
AAATCGTTGG AGGAGGCGGA GGCGAAGAAA CGCGCGGCGA AGGAAAAGAA ACGCGAACGC
ACGGCGAAGA AGACGGCGGC TAAAGCAAAA AAGACGGCGG CGGCGAAATC GTCGGCGGGT
GGGTCGGCGA AGCAAGCAGC GTTGATTAAA AAGTTGAAGG CGGAGAACGC CGCGTTGCGC
GCGAAAATCG CGAAGTTGAC TGGAAAGGAA GAGGAGCCGG CGGAGGAAGA GGAAGAAGAG
GAGGAAGAGG AAGAGGAAGA GGACGAAGAG GACGAAGAGG ACGAAGACGA AGACGAGGAA
GACGAAGAAG AGGAGGAAGA GGAAGATTCA GACGAAGAGT TCACGGAAAA GCCGGCGGCT
AAAAAGCCGA AGCCGGCGCC CAAGCCGGCG AAACAACAAT CTCCGTCGCC AGAACCGTCG
CCGGAACCGT CTCCAGTGAA AGCACCGTCG CCCGCGAAGG CGCCCACGCC CGCGCCCGCG
CCACCGGCAC CCAAGACGGA ACCGCCGAAA CCGGTCGAAC CGACGCCGGC GCCTGCGCCT
GCGGCGGAAC CGACCAACCC GCCACCGACG GCGGCCGAGC TCGGTAGCGC TGTTCGAAGG
TTACTAGTAA ACGCCGACAT GGAACAAGTT TCTATGAAGA GCGTTCGCAA GGATTTGGAA
ACCAAATTCG GGATGTCTCT GTCCGATCGT AAGGAGGAAA TAAAAAGACT TGTCACCGAG
TTTCTCGAAT CGCGATAG
 
Protein sequence
MDAPTPDAPA ATAPTPAPAS PSVKPKRERK KVEVFQVVDD APKKSLDVKP GRGTKLCEIP 
NVAFKLSKIP RKEELLKFVY RILYKGVGKQ QTIKRDIGEF SGWTFENDGE RAVKEDLLSR
AFKDTLHDLL DLFELPRGSG AEGKKEAQVA RLMTWLDAPK ASGKKSLEEA EAKKRAAKEK
KRERTAKKTA AKAKKTAAAK SSAGGSAKQA ALIKKLKAEN AALRAKIAKL TGKEEEPAEE
EEEEEEEEEE EDEEDEEDED EDEEDEEEEE EEDSDEEFTE KPAAKKPKPA PKPAKQQSPS
PEPSPEPSPV KAPSPAKAPT PAPAPPAPKT EPPKPVEPTP APAPAAEPTN PPPTAAELGS
AVRRLLVNAD MEQVSMKSVR KDLETKFGMS LSDRKEEIKR LVTEFLESR