Gene OSTLU_31856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_31856 
SymbolRPS16 
ID5001961 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009359 
Strand
Start bp648067 
End bp648929 
Gene Length863 bp 
Protein Length139 aa 
Translation table 
GC content59% 
IMG OID640417382 
ProductRibosomal protein S16, component of cytosolic 80S ribosome and 40S small subunit 
Protein accessionXP_001417833 
Protein GI145346723 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.442922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.257335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGTC CCGACCTCGC GTCGAACGAC AGAAACAACC TTCGCGTCGT TCGTTCGTTC 
GCGCGCGCGC GCTTCGACTC GCCTCGCGCG CATCGTCGCG TCATCGTCTC GTGCGTATTG
ACCCTAACCG CGACGTCCTC GGACGATCTT TCTCGACGCA GAGCGTGCAA ACCTTCGGGC
GCAAGGTACG TCGTCGCGCA TCGATCGGTG ACTCGTAATC GCATCTCTCG TATCGCGCGT
CGTTCGCGAC GCGGCGTCAT CGGTGGGAGG CGCTCGTGCG GGATGGTTTC GCGGCGTGCG
ATCCGCTAGG GCTTGGGTTT GGACTCGACT GACGCCGAAA CGCTCTTCTC GCGCAGAAAA
CTGCCGTCGC CGTGGCGCAC ACGAAGCGGG GCAAGGGCTT GATTCGCCTT AACGGTGTCC
CGATCGATCT CGTGCAGCCG GACACGCTCC GACTCAAGGC GGTCGAACCC ATTCTGTTGC
TCGGTAAGGA GCGATTCGCG AACGTGGACA TTCGCATTCG CGTGAAGGGT GGCGGACACG
TGTCGCAAAT GTACGCCGTG CGTCAGGCGA TTGCGAAGTC TCTCGTGGCG TATTACCAGA
AGTATGTCGA TGAGGCGAGC AAGAAGGAGA TCAAGGACCT TTTGTTGGCG TACGACAGAA
CCTTGCTCGT CGCGGATCCG CGCCGCATGG AGCCGAAGAA GGCTGGCGGT CGCGGTGCCC
GCGCGCGCTT CCAAAAGTCT TACCGTTAAA ATTTCTCGCG TTATCGTGGA AATTTTATGG
CGGGGGACGA CTTTGTGAGT GTCGACATAG TATTAGACGG ACAGACAATT TAGGTTTTGT
GATTAAAGGA GAGACGCAGA CCG
 
Protein sequence
MSVQTFGRKK TAVAVAHTKR GKGLIRLNGV PIDLVQPDTL RLKAVEPILL LGKERFANVD 
IRIRVKGGGH VSQMYAVRQA IAKSLVAYYQ KYVDEASKKE IKDLLLAYDR TLLVADPRRM
EPKKAGGRGA RARFQKSYR