| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_31760 |
|---|
| Symbol | |
|---|
| ID | 5002103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009359 |
|---|
| Strand | - |
|---|
| Start bp | 488624 |
|---|
| End bp | 489889 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | |
|---|
| GC content | 63% |
|---|
| IMG OID | 640417524 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001418025 |
|---|
| Protein GI | 145347119 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.264983 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0187143 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCGC TGTCGCCGAC GATGGAGCGC GGTGGGATCG CGCGGTGGCA TCGCGCGATC
GGCGATGAAA TCAAAGCCGG CGACGCGATC GCGGACGTGG AGACGGATAA GGCGACGATG
GCGATGGAAG CGACGGATGA TGGGTACCTG GCGGCGATCC TGGTGCCCGA GGGAGCGACG
GACGTGGAGG TGGGGACGCC GGTGTGCGTG ATGTGCGAGG AGGCGAGCGC GGTGGCGGCG
TTTAAGGATT ATAAAGCGAC GGAGACGGTG ACGACGGAAC CGGCGAAGAG CGCGGTGGAG
ACGGCGGTGA CGATGCCGGT GGTGAGGGCG TCGACGCGCG CGACGGCGCG GATGAGCGCG
CGCGCGAGCG GGGAACGGGT GTTCGCGTCG CCGCTGGCGA GACGGTTGGC CGAGGAACGA
GGCGTGCGAT TGGAGACCGT GAGCGGGAGT GGGCCGAACG GGCGCGTGAT CGCCGAGGAC
GTGCTCACGG CGCGCGCGTC GAGCGCGAGT GAGGCGGTGA CGCACACGGT TGTGGCGGAA
CATCCGTTGT CCAAGTTTTT CCCGGATTTC GAAGACGTGA GCGTGAGCGC CATCAAGCGC
GTCACCGCGG AGCGCTTGAC GGAAAGCAAG CAGCAACTGC CGCATTTCTA TCTCACCGTA
GACGTGCGCT TGGATAACAT GATGGGGATT CGTGAAACGT TGAACAAGCA GCTCGCTGAT
GATAAGGCTG CGGAAGGGGC GAAGATTAGC GTGAACGATT TCATCGTCAA GGCGAGCGCC
AAGGCGTTGC TCGCGGTGCC GGACGTGAAC GCCAGCTGGT TGGGCGATAA GATTCGCAAG
TACAAAAAAG CTGATATTTC TGTAGCGGTG CAGACCGAGC GCGGGCTGAT GGTGCCCATC
GTGCGATCTG CGTGCTGCCT GGGGTTGAAG TCTATCAGCG CCGAAGTCAA GTCGCTCGCC
GGCCGCGCGC GCAGCGGCTC TCTCACGCCC CAGGACATGA CTGGAGGCAC GTTTACCATT
AGCAACCTCG GCATGTTCGG CGTGAAGAAC TTCGCTGCGA TCGTAAACCC GCCGCAAGCG
GCGATCCTCG CCGTCGGCGG AGCTAGAAAG GAAGTCGTCA AGAACGCAGA GGGCGGCTAC
GAGGAAGTCT TGGTAATGAG CGCGACTTTG AGCTGCGATC ATCGCGTCGT GGATGGAGCC
GTGGGGGCGC AGTGGCTTCA ATCCTTCAAG TGTTATTTAG AAGATCCGAT GACGATGTTA
CTCTAG
|
|---|
| Protein sequence | MPALSPTMER GGIARWHRAI GDEIKAGDAI ADVETDKATM AMEATDDGYL AAILVPEGAT
DVEVGTPVCV MCEEASAVAA FKDYKATETV TTEPAKSAVE TAVTMPVVRA STRATARMSA
RASGERVFAS PLARRLAEER GVRLETVSGS GPNGRVIAED VLTARASSAS EAVTHTVVAE
HPLSKFFPDF EDVSVSAIKR VTAERLTESK QQLPHFYLTV DVRLDNMMGI RETLNKQLAD
DKAAEGAKIS VNDFIVKASA KALLAVPDVN ASWLGDKIRK YKKADISVAV QTERGLMVPI
VRSACCLGLK SISAEVKSLA GRARSGSLTP QDMTGGTFTI SNLGMFGVKN FAAIVNPPQA
AILAVGGARK EVVKNAEGGY EEVLVMSATL SCDHRVVDGA VGAQWLQSFK CYLEDPMTML
L
|
|---|
| |