| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_31014 |
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| Symbol | |
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| ID | 5001417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009358 |
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| Strand | - |
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| Start bp | 158607 |
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| End bp | 160368 |
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| Gene Length | 1762 bp |
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| Protein Length | 560 aa |
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| Translation table | |
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| GC content | 64% |
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| IMG OID | 640416838 |
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| Product | MOP(MATE) family transporter: multidrug efflux |
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| Protein accession | XP_001417438 |
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| Protein GI | 145345902 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.00547148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGACGG CCCGACCGCG CGCGACCGAC GACGCGACGG CGCGCGACGC GCGGACGCGG
GCGCGGCGCA CGATCCTGGG CGTCGATCGA GCGACCGGGG AAGCGATTCC GGACTGGGAC
GAGTGCGCGG AGTGGCGGGC GCGGGCGCCG CCGAGCGCGG AGACGCTCGA GCTGCTGGAC
GCGTCGATTT TCGCGCTCGC GCTGCCGGGC GTGGCGGAGC TGCTGTTGGA TCCGGTCATG
GGCGCGGTGG ACACGGCGTT CATCGGAAGG CTGACGGGAG ACGGCGCGGC GGAGGCGCTG
GGGGGGTTGG CGGTGAGCAC GACGTGCTTT ACGTTTTGCT TCAAGTTGTT TAACTTTTTA
GCCGTCGTCA CGGGACCGCT CGTGGCGGCG AAAATATCGG CGAGCGGGGG GCGGGATTCG
GCGGAGGGGC GGCGGGCGGC GAAGAAGACG GTCGGGAGCG CGATGGCGCT CGCGCTCGCG
CTCGGGTTCG CGACGATGGG GATCATGGAG GTTTTCACGG ATGATTTATT GGCGTTTTGC
GGGGCGAGTC ACGAGGCGTT GCTCAACCCG AGCGAAGATT TGCTTCCCGA CGCCGACGTG
CCGACGATAA AGGGGATGTT GGAGTACGGG GAGGATTACT TGCGAATTCG CGCCGCGTCT
TTGCCCGCGT GCTTGATCGT CATGGTGGGC GTCGGCGCGT TTCGCGGGTT GTTGGACACG
CGGACGCCGC TCTACGTCGC CGTCGTCACG GAAATTTTCC ACCTCGGCTT GGATCCGTTT
CTCATTTACG GCATCGGCCC GTTCCCGGCG TTCGACGTCG CCGGCGCGGC GACGGCGACG
ACGGTAGCGG AATGGGTCGG CGCGATTTGG TTTTGGAAGC TCATGATGGA TGAGGAGATT
TTAGATTTTC AATCCGTCTT TCGTCTGCCA GACGAGTCCA ACGACGACTT GGGTACGCTC
GTCAGCGGAT CGACGTCGCA GCTCGCGCGA ACGGTGCTTT TACAAACCGT ACTCGTTCGC
GCCACGTCGA CGGCGGCGAT GCTCGGCGCC GCGGGCGCGC ATCAAGTGTG TTTGCAGGCG
TGGTGGGTCA CGCTGTTTGG CTTGGACTCT GTCGCCGTGA GCGCGCAGGC GTTGGTTGCT
GCGAGTCTCG GGAAAAATGA CGTTCCCGGC GCGCGCATCG CTGCCGATCG AGCGCTGAGC
TGGGGCGTCG GCGCGGGCGT TCTCGTCGGC GTCGTCGTGT TCTTGTCCGC CGATCAGTTG
CCGTATATAT TCACCAACGA CGCCGAAATC GCCGCGCAAG CGGCGACGCC GATACGCATC
TTATCCCTCT TGCAGCCGCT CAACTCCGCG GTTTTCGTCG GCGACGGCGT GTTTCAAGGA
AGCGCGGATT TCGACTTCCT CGCCAAAGCC ATGGCTATTT CCGCGGGAGG GGGCATCTTA
GCGCTGACGG CGGCTGGGCA AATGGAAGGC GCTTCGCTCA CGTCGGTGTG GCTGGGGATG
GCGACTTTGA TGTTCGGTCG AGCCGCCACG CTCGGTTGGC GTTATTTCAA GGACGACGAG
TCTCCACTCT ACGTCACGCC ATTCGAGTGC GCGGTTTACT ATGACGATTT ACCGAGCGTG
GACGTCGACT TCGTCGACGT CGACGCGAAG GTTTCGAAAG ACGAGACGAC GAAGCCGCGA
TGAGCGTTCC TCGACGACGA CGACGCCGAC CCGCGTTGTC GTTCTTGTCG TTGTTCTCGT
TGTTGTTGTA CAGTACAAAC GT
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| Protein sequence | MPTARPRATD DATARDARTR ARRTILGVDR ATGEAIPDWD ECAEWRARAP PSAETLELLD
ASIFALALPG VAELLLDPVM GAVDTAFIGR LTGDGAAEAL GGLAVSTTCF TFCFKLFNFL
AVVTGPLVAA KISASGGRDS AEGRRAAKKT VGSAMALALA LGFATMGIME VFTDDLLAFC
GASHEALLNP SEDLLPDADV PTIKGMLEYG EDYLRIRAAS LPACLIVMVG VGAFRGLLDT
RTPLYVAVVT EIFHLGLDPF LIYGIGPFPA FDVAGAATAT TVAEWVGAIW FWKLMMDEEI
LDFQSVFRLP DESNDDLGTL VSGSTSQLAR TVLLQTVLVR ATSTAAMLGA AGAHQVCLQA
WWVTLFGLDS VAVSAQALVA ASLGKNDVPG ARIAADRALS WGVGAGVLVG VVVFLSADQL
PYIFTNDAEI AAQAATPIRI LSLLQPLNSA VFVGDGVFQG SADFDFLAKA MAISAGGGIL
ALTAAGQMEG ASLTSVWLGM ATLMFGRAAT LGWRYFKDDE SPLYVTPFEC AVYYDDLPSV
DVDFVDVDAK VSKDETTKPR
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