Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_30686 |
Symbol | |
ID | 5000983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009357 |
Strand | + |
Start bp | 591474 |
End bp | 593112 |
Gene Length | 1639 bp |
Protein Length | 528 aa |
Translation table | |
GC content | 58% |
IMG OID | 640416404 |
Product | predicted protein |
Protein accession | XP_001416704 |
Protein GI | 145344364 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5347] GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.837548 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CGCGCGCGCG CGACGTGCGC GAGCGCGAGC GAGGGGAAAA CGCGCGGAAA AGATGAACGC CGAGGCGCGA CAGACGCTGC ACGCGCTCAT GAGCGCGGCT GAAAACCGCA CGTGTGCGGA TTGCGCGACG CACAACCCAG ACTGGGCGAG CGTGAACCAC GGGATATTCC TCTGCCTGAA CTGCAGCGGC GTCCATCGAT CGCTGGGCGT GCACGTGAGC TTCGTGCGGT CGGCGACGAT GGACTCTTGG AGCGCGGAAC AGTTGGCGTC GATGCGGTGC TCGAGTAACG AGAAGATGAA TGCGTTTTTG GAAAAGTATG GGACGGCGCG CGGGACGAGC GCGCGGGTGA AATACGAGAG CGCGGCGGCG CAGGCGTGGC GGGAAAAGGT GCGATGTGCG GTGCAGGGGA AGGAGTGGAA AAAGCCAAAG GGGCTGAAGA GCGGTGGAGG CTCGGGGGAG GGGAGAGAGG GGGGTAGAAA GCCGAGCGGG AGCGGGTCGT CGGAGTTGTT TCAATTTGAG GATACAAACG AGAGGAAGAA GAGCTCGGGG AAGACGAACG CGAAGGGTGG GTACGACTTA TCCACCGGAC AAGGGTCATT GGTGAGCAAG CGGTACGTGC ATCACGACGA CGGGTGGGTG CCGCCACCGC CGCCGTTACC GAAAGGCGCG AAGGCAGGGG AGTTTTTACA CGGATTGACG CCGCACGAGT GGGTGGCGTT TCTGAAAAAG TGTGCGAGTC AAGACGATCG AACGTATCAC TTGAAGAACA TGACGGAAGA AGAGCGCGCA CAAGTCGTTG CGGCGATGTC TGGTCAACCC ATTCCGCCGC GCTCTGGGAA GAAGCACGTG CCAAAAATGA CGAGCGACGC GGCGACAAAT TCTTCCGCGA GTGATTTGAA GACGTTGAAT CCATTCGATG GTTTCGGTAG TAGTAGTGGT GGGGATGATT TTTTCGACGA TAGCGGAGCG GCGAGAAAGG AAAAGAAGTC GAAGAAGGAG AAGAAGGAAA AAAAGGAGAA GAAGGAAAAG TCATCGGCGA ACGACAATGA GACGGAGCTT GAGCGACGCA TGCGAGAAGC GGGCGAGGCG GCGAAAGCTT TAGCGCGCGA ACGCATGCTT GTGAACCCGA ACCGCGCGCA AGAAGATGCT TCTTCGTCTG TGTACGCCGT GCCACAGAAG AAGAAACCAT CTTATTCACC AAAGCAATCG TATTTTCACG GAAGCTCAAA TCTCGGCTCT GGTGCGTCTT CGCGGTACGC CGGCTTCGGG AACACGTCTT CGAATCCGAA GGCTCAGGAT TGGCAAGACA AGGTAAAGGT TGGGATGGAG TCTGCTAAAG GCTGGTTGTC TGGGACACTA AAGGGTATCG CGGCCAAGCT TGACAATACT GCCAGCGCGC AGCGTACAGC GCCGCCACCG TCTTACAATC AGACGCCCGG CCACTATCAA CCGGCAGGAC GCCCACCAGA AGTGGCGTCG TACGAGCCAC CGCAGGTGCA ATCGTACACT CGTCCGCCGA GACCGTCCCC GAAAGCAAAA GCCGAAAAGT TCTACAGTTC GTCGGATTCT GACAGTAGTG AAGATGAAGA CACCCCAGAG AAGCTCGCGT CCGACTTTTC AAATTTGATG GATAAGTGA
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Protein sequence | MNAEARQTLH ALMSAAENRT CADCATHNPD WASVNHGIFL CLNCSGVHRS LGVHVSFVRS ATMDSWSAEQ LASMRCSSNE KMNAFLEKYG TARGTSARVK YESAAAQAWR EKVRCAVQGK EWKKPKGLKS GGGSGEGREG GRKPSGSGSS ELFQFEDTNE RKKSSGKTNA KGGYDLSTGQ GSLVSKRYVH HDDGWVPPPP PLPKGAKAGE FLHGLTPHEW VAFLKKCASQ DDRTYHLKNM TEEERAQVVA AMSGQPIPPR SGKKHVPKMT SDAATNSSAS DLKTLNPFDG FGSSSGGDDF FDDSGAARKE KKSKKEKKEK KEKKEKSSAN DNETELERRM REAGEAAKAL ARERMLVNPN RAQEDASSSV YAVPQKKKPS YSPKQSYFHG SSNLGSGASS RYAGFGNTSS NPKAQDWQDK VKVGMESAKG WLSGTLKGIA AKLDNTASAQ RTAPPPSYNQ TPGHYQPAGR PPEVASYEPP QVQSYTRPPR PSPKAKAEKF YSSSDSDSSE DEDTPEKLAS DFSNLMDK
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