Gene OSTLU_3060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_3060 
Symbol 
ID5004281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009365 
Strand
Start bp67353 
End bp68390 
Gene Length1038 bp 
Protein Length346 aa 
Translation table 
GC content58% 
IMG OID640419702 
Productpredicted protein 
Protein accessionXP_001420404 
Protein GI145352117 
COG category[R] General function prediction only 
COG ID[COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.206644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CCGGCGTGGA TACGGCCGCC GGGAACGATG TTCATCGTCG ATGGGTTCGA GTACGCGGCG 
TCGAGCGAAG CGCGGTGCGA ACACTGGTTT CTGACGCACT TTCACGCGGA TCATCACCGC
GGGTTGACGC GAACGTTCGA TCGCGGCGTC GTGTACGGAA CGCGGACGAC GACGGAGTTG
GTGCGAACGA AGATCGGGGT GCCGCGCGAA CGGTTGCGCG TGGTTGAGTT CGGCGTCGTC
GTGCGCGTGG ATGGCGTGGA CGTGACGTTC TTGCGCGCGA ATCATTGCCC GGGAGCGGCG
ATGATTTGTT TCGAGTTTCC GCATCGGCGC GACGCGTCGC CGGTGTTGCA CACGGGAGAT
TTTAGATTTC ACGACGGCAT GCGGAACGAT CCGACGCTTT TGCGGATCAC GAGCGATCCT
TCGGCGCCGA GGCCGATATT GATCCTCGAC ACGACGTATT GTTCGCTCGA ACACGACGAT
TTTCCGACGC AAGAGCGCGT GTTGAAAGCC GTTCGCGACG CCGTGGTGCA CGAGGACTTG
CTCTCGACGC GCAAGTTGTT CTTGTTCGGG ACGTACACGA TCGGAAAAGA GAAAGTGTTT
TTAGAAGCTG CAAAGGTGTT GAATCGCAAG GTGTACATCG GAAAGGCGAA GCGAAGCGTC
ATGGACGCCA TAGCGCTCGA TCCCGAGGAG AGAAGCGCCA TGACGCACGA CGACTCGAAA
ACAAACTTGC ACGTCGTTCC GATGGGCTCG ACGAGTTTCA TGAAGATGGC GTCCATTTTG
AAGTATTATA AAAGTCGATT CGACACCGTT ATCGCGTTTC GTCCGACGGG TTGGACGTTT
AGCGCGCAGA AGAAAACGGC GAGAGCAACG TCGCGAAGGC AGCGCGGGAG GCTGATTCAA
TACGGTTTGC CGTACTCCGA ACACTCGAGC CTGAACGAGT TACGCGAGTT TGTGCGCTTC
ATGAACCCAA AGTTCATTTT CCCGCACGTC AACAACGACG GCGGCGAAAA CGCGAAGAGA
ATGCTAACGC TGCTTCGC
 
Protein sequence
PAWIRPPGTM FIVDGFEYAA SSEARCEHWF LTHFHADHHR GLTRTFDRGV VYGTRTTTEL 
VRTKIGVPRE RLRVVEFGVV VRVDGVDVTF LRANHCPGAA MICFEFPHRR DASPVLHTGD
FRFHDGMRND PTLLRITSDP SAPRPILILD TTYCSLEHDD FPTQERVLKA VRDAVVHEDL
LSTRKLFLFG TYTIGKEKVF LEAAKVLNRK VYIGKAKRSV MDAIALDPEE RSAMTHDDSK
TNLHVVPMGS TSFMKMASIL KYYKSRFDTV IAFRPTGWTF SAQKKTARAT SRRQRGRLIQ
YGLPYSEHSS LNELREFVRF MNPKFIFPHV NNDGGENAKR MLTLLR