| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_30597 |
|---|
| Symbol | |
|---|
| ID | 5001067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009357 |
|---|
| Strand | - |
|---|
| Start bp | 433308 |
|---|
| End bp | 434882 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | |
|---|
| GC content | 67% |
|---|
| IMG OID | 640416488 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001416947 |
|---|
| Protein GI | 145344870 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.355586 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0445175 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGCC CGACGCGCGC CGAGCTCGCG CGTCACGCCC CGGCGCTGGC GTGCTACTTT
TTCCTGACCC TCGCCGTGGA GTCGTCGACG ACGCCGCTCG CGCTGGTGCG GAATCGCGCG
CTCGCGTGGG ACGAAACGCC CGAGGGCGCG AATCGCTTTT ACGCCTTTGT GTTCGCGGTG
GCGACGTTAA AGCCGCTGTA CGCGTCGGTG AGCGACCGAT CGCGCGCGAG GGGGGGCACG
CGAGCGGCGC ACGTCGCGCT CGGATGCGCG GTCGCGCTGG CGGGCGCGCT CGGGTCGAGC
GCGGCGCGGA CGACGGCGCA GACGTACGGG TTCGGGACGC TGGCGAGCGC GGGCGCGGCG
CACGCGTACG CGTCGTTGGA TGGATACGTC GTCGAGAGGT TCGGCGGGGA AGCGGGAAGG
TCGAGGGATG AGGTGGTGAT GGCGCAGGCG TGCGCGATGG CGGCGAGGAC GGCGGGGAGC
GTGGTGGGGG ATTTAGCGAG CGCGGGAGGA CTGGCGGCGG CGAGCGCGCG GACGGCGGCG
GCGGCGAGCG GGATTTGGAT GCTCGTCGCG ATCGCTGTGG CGTTAGTGAG CGTGGATGAG
AGTGATATAT CGCGAGATGT CGATTCGGGA AGAGAAGATG AGCGTGAAAT GGAGTCGCGG
TCGTGCGCGT CGTGGACGGC GCGAGCGAAG GAGGCGTACG CGCCGCTCGC CGAGGTTGAT
TTTTTACGGT GCGCCGCGTT GGTGTTTTTA TACCGCATCG CACCGACGGC GTTGGATACA
TTCGCGTCGT ATACGTACGC CGTGTTCAGC GATAGGATGA AGGATTATGA GTTTGGTTTG
GTGGCGTTCT TTACGTCGCT CGGCGCGCTC GCCGCGCCGG CGGCGTTCGG TTGGGCGTTC
GGAGACGCAA GCGCGTCTGG TAGTTCTGTG GGTGAAAACG ACGCCGGAAC GTTGACGAAG
ATTCGTGCGC TTCTCGTCTC GTCGCCCACG TGGATGATGT TCGTCTTCGG CGCCGTCGTA
GACGCGGCGC TGGGTCTCTG TCGACTCTTC ATCGTGTGGC GGCCGCCCGC AACCGGCGCC
GTGGCGGCGT TATCTATCGT CAACGCGCTC GCAATTTTTG GCTTGCGCGT GGGTTACATG
CCAATCGTCA CATTAGGCGC GATCATGGCT CCGCAAAACC TCGAAGCCGT CGGTTTCGCG
GCGCTGATTT TCGCCAGCGA CGTCGGCGCG CTCGTCTCCG CCTACGTCTC CGCCGGCGTC
GTCCGCGCCC TACACATCGG TGCGCCCACG CGCACGGACA CCACCGGCGC CGTCATTCCA
ACCGATCGTT CGTGGTCACC TCTCACCGCC TTCCTCGTGC TCGTCGCCGC GTGCAAGATC
ATCATCCCGT GCGTCTCCGC GCCGCCGCTC CTTTCGTCGG CGTCTCGGCG TTCGCGCGCC
GCCGACTTCT CCCTCCTCCC CGCCGACGCC GATCGATCCC ACGCCACCGT CGACGACGCC
GCGCGCGATT CCAACGCGTC AACGCGGCCG TCTTCTCCCC CTTTCGACCT CGCATCGCCG
TCCGCGGAGC TGTAA
|
|---|
| Protein sequence | MTRPTRAELA RHAPALACYF FLTLAVESST TPLALVRNRA LAWDETPEGA NRFYAFVFAV
ATLKPLYASV SDRSRARGGT RAAHVALGCA VALAGALGSS AARTTAQTYG FGTLASAGAA
HAYASLDGYV VERFGGEAGR SRDEVVMAQA CAMAARTAGS VVGDLASAGG LAAASARTAA
AASGIWMLVA IAVALVSVDE SDISRDVDSG REDEREMESR SCASWTARAK EAYAPLAEVD
FLRCAALVFL YRIAPTALDT FASYTYAVFS DRMKDYEFGL VAFFTSLGAL AAPAAFGWAF
GDASASGSSV GENDAGTLTK IRALLVSSPT WMMFVFGAVV DAALGLCRLF IVWRPPATGA
VAALSIVNAL AIFGLRVGYM PIVTLGAIMA PQNLEAVGFA ALIFASDVGA LVSAYVSAGV
VRALHIGAPT RTDTTGAVIP TDRSWSPLTA FLVLVAACKI IIPCVSAPPL LSSASRRSRA
ADFSLLPADA DRSHATVDDA ARDSNASTRP SSPPFDLASP SAEL
|
|---|
| |