Gene OSTLU_30562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_30562 
Symbol 
ID5000690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009357 
Strand
Start bp382348 
End bp383772 
Gene Length1425 bp 
Protein Length474 aa 
Translation table 
GC content56% 
IMG OID640416111 
Productpredicted protein 
Protein accessionXP_001416931 
Protein GI145344838 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.387537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAAC GTCTGAAGAT GCGCGTGCAA GGCGCGGACG GGGCGTGTCC AGCGCCGTTG 
CAAGGATTTG AGGAACTGCA CGAGAGGTAC AAGTGCGGCC GGCGCCTGCT CGAGCGCATG
CGCGAGGCGA ATTTCAAAGA ACCGACGCCG ATTCAGCGTC AAGCGGTGCC GATCTTGTGC
TCGGGGAGCG AATTACTCGC CATCGCGCCC ACGGGGAGCG GTAAAACTCT GGCGTTTCTG
TTGCCGATTA TCATGAAGCT CGGAACGCAC GAAGAGGGCG GCGCGCGAGC GCTCTTGCTC
GCGCCCACCA AGGAGCTCGC GGGGCAGTCG GCGCGAATCT TACGCATTCT CTCGCGAGGA
GTCAGTGGGT TGAAGTCGTG TCTGTTGACG AAAGCGACGG CTGGGAACGA TTTTAGCAAG
GTGGACATCG TCGTCGCGAC GCCGATGCGA CTCAAGATTT TGTTGCAGCA CGACAAGATT
GATTTATCCA AGGTGCTTTA TCTCGTGTTG GATGAGGCGG ATAAACTCTT CGAGATGGGT
TTTGTCGAGC AGATTGACGC CGTTGTCGCG GCGTGCGACA ACAAAGACGT GACCCGCGCG
TTGTTCAGCG CGACGCTGCC CGAAAAAGTA GAGGAACTCG CGCGAAGCGT CATGGCGCGC
CCGATTCGGC TCACCGTGGG TGAGCGAAAT AGCGCGTCGA ATACGATTTC ACAGCGTATG
GTATTTTGTG GGCACGAGGC GGGGAAGCTG TTGGCGTTAC GTCAAATCAT TCGCGAAGGC
ATCAAGCCAC CGGTTATTAT TTTCACGCAG TCAAAGGAGC GAGCGAAGCA TCTCGCTAAA
GAGCTCACGG GCGATGGATT ACACATCGGA CTGATTCACG CCGAAATGTC AGATTCTAAG
CGCGAAGAGC AAGTCGATCG ATTCCGCATG GGCGAGACGT GGGTTCTTAT CGCGACGGAT
TTAATGGCGC GCGGGATGGA TTTCGTCGGT GTCTCCACCG TCATCAACTT TGATTTTCCT
GGTTCTCCCA CGAGTTACAT CCATCGCATC GGTCGTAGTG GTCGCGCGGG TCGTCCTGGA
GCTGCGATTA CGTTTTTCAC CGAAGAAGAC GCGCAAAGAG GAGACTTGAA ACCGATCGCC
AACGTGATGA AGAATAGCGG CTGCGAAGTG CCAGAGTGGA TGTTGAATCA CACCGGCGAG
AAGGGTTTGC GCCGTCGGAA GCGTAAAGAC GGCAAAGAAG ACAATCCGCG ACGTGCGCCT
CTTGACATGC CTATGGGTGC GGACCCGAAA GTGTACGCGC CCGACAAGAA GAAGCGCAAG
AAGACGCCGC GCAAGAAAAA TGACGACGAG GCGATGCCGC CGCTACCGAA AAAGTGGAAA
GGCAAGTCCA AGTCCAAGGA GAAAAAGGAA AAGGAAAAGA AGTGA
 
Protein sequence
MRKRLKMRVQ GADGACPAPL QGFEELHERY KCGRRLLERM REANFKEPTP IQRQAVPILC 
SGSELLAIAP TGSGKTLAFL LPIIMKLGTH EEGGARALLL APTKELAGQS ARILRILSRG
VSGLKSCLLT KATAGNDFSK VDIVVATPMR LKILLQHDKI DLSKVLYLVL DEADKLFEMG
FVEQIDAVVA ACDNKDVTRA LFSATLPEKV EELARSVMAR PIRLTVGERN SASNTISQRM
VFCGHEAGKL LALRQIIREG IKPPVIIFTQ SKERAKHLAK ELTGDGLHIG LIHAEMSDSK
REEQVDRFRM GETWVLIATD LMARGMDFVG VSTVINFDFP GSPTSYIHRI GRSGRAGRPG
AAITFFTEED AQRGDLKPIA NVMKNSGCEV PEWMLNHTGE KGLRRRKRKD GKEDNPRRAP
LDMPMGADPK VYAPDKKKRK KTPRKKNDDE AMPPLPKKWK GKSKSKEKKE KEKK