| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_29594 |
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| Symbol | |
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| ID | 5006826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009374 |
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| Strand | - |
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| Start bp | 495510 |
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| End bp | 499061 |
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| Gene Length | 3552 bp |
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| Protein Length | 1183 aa |
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| Translation table | |
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| GC content | 57% |
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| IMG OID | 640422247 |
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| Product | RND family transporter: Patched (Ptc) segmentation polarity protein |
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| Protein accession | XP_001422769 |
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| Protein GI | 145357117 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAA TAAGAGCGTG CGTCGCGGCG TGCGCGGTGC GTCCGCGGTG CGGAGCGGTG
GTCGCGGCGT GCGCGCTCGC GGGGGGGTTC GGCGCGCTCT GGGGAAGGGT CGAGGTCGAC
GCGCTGAAGT TGTGGGTCGA CGCGCGAGCG CGGGAGGAGG TAAAGACGTA CGAAGACGCG
TTCGGTGACT ATAGGACGCA GGCGTTCGTC GTGACGGCGA AGCGAGCGCC GACGTTGGCG
TCGAGGGAGG CGTTCTTAGA ACTCAAGGAC TGGCACGACT GGATGTACGG TTTGGAGGCG
CCGTCCGCGG CGGGGTCGTA CACCCTGCAC GATTTTTGCT ACAAGTACGT CGATTCCGAA
CCGCACACGC CGTGTTTTCA AATAACGCCG TTGGATTGTT TCGCGGAAGG TGCGGTGAGC
GCGCCGGGAG GGGCTGAGAA GAACGATGCG TTCGCGGCGT CGTACTCGGT TCGCCCGAGC
GTGGCATCAT TTGATTTCGA GAAAGATTTC AATCAGTCTT TCGCTCGAGG GTGCAAACAA
TGGTTCAATC TCGCGACTCC CCCGAAAGTA CTGTTTTCGG GATTGCGAGA AGACGCGAAC
GGGTTAGATG CGATGCGCGT GGTGTTTCAA ACGCGCGACG CCGCCTCGTT GGCCGCTCGC
GGCGTGGTGC GAACGACTTT TACGCCGACG CAGGCGTCGG CGGTCGACGT GTTGGGCTGT
CGCGCGGGGA CGCCATCGTT GGAAGATTGC TCGTGCATAG AAACGTTTAA TTTGTTTTCG
GTGTTGGAAT ACGGTTGCGT TCCGGAGGGC GACGCGGAGC AGCCACCCAC GTGCTGCGAG
TATATGGCGA GACTACGCGA GCATCCGTGC GTCGAGACGT TGTGGATGAG CGACGCTACG
TTGTTCGCGC TCGGGAATCA AGTGTTCACT ACGTGCGGAA TAGCAAGAAT TTCGTTCGAT
TCGCAGTGTG TGAGACTTCC GAACGGAGAA ACGTTACGCA AGTCTTCGAC GAGTGGAATC
GAAGACGATT ACTACGAAGA CTTGAGCGCT TCAACGCCAG TGACAAACGT CTTCGAGTGT
GGATTCAAGC TACGTTCGCT GCAAACGAAA TGTCCATTGA TCGCCGAGGG TAATTACACG
GCTGCGAGCG AGTGTTGTGC GAGCTTGGAG ACTTTTGCCT TGTCGAAATG TCACTGCGGG
GATCTTCACT GCGGAGGAAG ATCGAGACCG TGCGAGTCCC TCTTCGCTCG CGATGACGTC
GGACAAATCG TACAGTTTTG TACGCTGAGC GGATTCTCGA CGCCTAGTTT CGATGTTTGC
GGTAGGAATA CGAGTGTTGT CACTCCACCG GCGAAGCGCG CGTCCAAATC TGCGTCAACG
GCATCGACTT TGATTTGGGT TCCCGCACAC GAACGCCGCG AACTCTCGAA AGAGGACGCT
GAAGATTTAC TGTTGGGTTG GGAATCACTT TGGCTCTCGC AAATCGACGC CAAAATTGCG
AATTACGAGC ACATTTCAAT CGCTTACATG TCACAACGAA GTACTGAGGA TATCATCGCC
GCCGCGTCGA GGGGCGCCTT CGTGCTCCTC TTCATTGGTT ACTTCACCGT CGCCTTTTAC
GTCGTGACAT ATTTCCATCT CAGCCCGAAC GCTGCGTGTG GCCCTCGAGC AGCTGTCGAA
GGCGTCTCTG TAGTCGCTTT AAGTACGTGG GCGTCTTTAG GATTGAGTGC CGCGCTCTCG
CGAATCTCTG GCGTGACATT TAACGCCATC ACGCTTCAAG TTTTGCCGTT CTTATCGCTC
GGCTTGGGCG TGAATGATTT CTTTGTGCTC GCGTCGCACG CCGCGGCGGC TACGGCAGAA
CTTGAAGATT CATTCGTTGA CGGTGATTCA ATAAGTTCTA ATGAAGACAT ACTCGTTCGC
ACTTTACGCG ATGGTGGTAC ATCGGTGACA CTGTCCAGCG CGATGAACTT TGCCGCGTTC
TTGCTCGGCG CCATTTCGCC GGTGCCCGCG GTGAGAAACT TTGGTATCCA AATAGCGTGC
GCAGTGGCAT GCAACTACAT CGTCGCGTTG TTGGTTTTCC CTGGCATTCT GTATCGACAT
CTCGAGCGAC GCAGCGCATC TGAGGCGAGG AGGGTATCAG AAGACGTCGA ATGCACGACA
CCGCTCCGTC GCGACTCTTC CTTTGCGAAG ATTTCATCGG CGGTGTATGA GCCGTTTGTG
CGGTGGCGTG AGCGTTTGAT TGCTGCACCA CGCGCAAGCA CGGCGTTACG CCTTGCGGTG
CTCGCCATGT ATGGTGTCTT CGCCGTGTAT TTGATCGCCG GCATTCCAAC AGTACGCCTT
GGACTCGAAA TGCGGGACGT CATACCGAGC GATTCTTACA TGGCGCCGTT CGTGGCGGAG
ATGGAGCATC GATTCGCCAC GTATCCTGTC TTCGTCTTCG TCTCGAATGT CGATTTTGCT
CGGTACGCCG TGGCGTTGCG AGAACTCGAG CGCGACTTTC TCGACGTCGC GCACGTCGAC
GTAACGCACG GGTCAACCAA CTTCATGATT TACTACACCG AATACGCGGA ATCGAGAGTT
GCGGGCGGGC ATTCGTGTTC GCTGAACGAC ACGCGTTGGT ACTACGACGC CACGAGGGCG
GCGGAACCTT ACGATTCGTG CGCTGCGGAC GCGCTCGACG AGAATCAAAC GTTTACATGC
ATGGTAAAGT GCTTAGCACA CGTACCTCAG ACGCAATCGA AGCGGTGCGA ATTCCACAAA
GGCGCGAGCC GCGAGCGAAG TCGATGCTAC TGCCCTCATC GACTGATTTA CAACGAAGAC
GCATTCGTTC GCGAGTTCCC GGCTTTTCTC GCCGGCGGTC AGCGCGGCGA AATTTCGCGC
GCGTTCACAA CACTCGGAAG CAACGCGTCA ATCGTCACGA GCGCCAGGCT GTTGTTTTAC
GTCGAAGACG TTTTCGACGT TGACGATAAA CTCGCGCACA TCCGCCAGGC TCGAAGCGCG
TTGAAGAATT CTGACATCGT CGCGCGAGGA GGTGCCCGAG CCTTCCCATT CGACGTAGCG
CTGTATGCGA TGAACGAACA GTACTTGAAC ATCAAGTCAA ACACGTGGCG AGCGCTCATC
ATAGGACTCG TGACGTCCAC AATCATTATG TTCGTTGCTT TTCGCGGCGA CGTTCGAGCG
ACTATGGTGG CCTCTGCGAC GCTCGCGTTC ACACAAGCTG AGCTCTTCGG CGCCATGGGT
CGGTTCAATG TCAAGCTCAA CGGCGCATCC ATGGCGAACT TGATCATTTC GACCGGTGTC
GTGAATGAAT TCATCGCTCA CATGTCCCGC GCGTTTTTCT CTTCCGACCG GCGCGCGGGC
GCCGCCTTCG CATCCATCGC TCCCGCTTTG TTCAACGCTG GAGTGACCAC GTTCCTTGGT
GTCATCCCGA GCGCGTTCGC GCGGTACGAG TACTTCCGCG TGTACTTTTT CAGTCAATGG
TGCGTGATTT TGCTCTTCGC CGTGGCGAAT GGCGTCGTCT TTCTACCAAT AGCGCTCAGT
CTCTTCGCGT GA
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| Protein sequence | MEKIRACVAA CAVRPRCGAV VAACALAGGF GALWGRVEVD ALKLWVDARA REEVKTYEDA
FGDYRTQAFV VTAKRAPTLA SREAFLELKD WHDWMYGLEA PSAAGSYTLH DFCYKYVDSE
PHTPCFQITP LDCFAEGAVS APGGAEKNDA FAASYSVRPS VASFDFEKDF NQSFARGCKQ
WFNLATPPKV LFSGLREDAN GLDAMRVVFQ TRDAASLAAR GVVRTTFTPT QASAVDVLGC
RAGTPSLEDC SCIETFNLFS VLEYGCVPEG DAEQPPTCCE YMARLREHPC VETLWMSDAT
LFALGNQVFT TCGIARISFD SQCVRLPNGE TLRKSSTSGI EDDYYEDLSA STPVTNVFEC
GFKLRSLQTK CPLIAEGNYT AASECCASLE TFALSKCHCG DLHCGGRSRP CESLFARDDV
GQIVQFCTLS GFSTPSFDVC GRNTSVVTPP AKRASKSAST ASTLIWVPAH ERRELSKEDA
EDLLLGWESL WLSQIDAKIA NYEHISIAYM SQRSTEDIIA AASRGAFVLL FIGYFTVAFY
VVTYFHLSPN AACGPRAAVE GVSVVALSTW ASLGLSAALS RISGVTFNAI TLQVLPFLSL
GLGVNDFFVL ASHAAAATAE LEDSFVDGDS ISSNEDILVR TLRDGGTSVT LSSAMNFAAF
LLGAISPVPA VRNFGIQIAC AVACNYIVAL LVFPGILYRH LERRSASEAR RVSEDVECTT
PLRRDSSFAK ISSAVYEPFV RWRERLIAAP RASTALRLAV LAMYGVFAVY LIAGIPTVRL
GLEMRDVIPS DSYMAPFVAE MEHRFATYPV FVFVSNVDFA RYAVALRELE RDFLDVAHVD
VTHGSTNFMI YYTEYAESRV AGGHSCSLND TRWYYDATRA AEPYDSCAAD ALDENQTFTC
MVKCLAHVPQ TQSKRCEFHK GASRERSRCY CPHRLIYNED AFVREFPAFL AGGQRGEISR
AFTTLGSNAS IVTSARLLFY VEDVFDVDDK LAHIRQARSA LKNSDIVARG GARAFPFDVA
LYAMNEQYLN IKSNTWRALI IGLVTSTIIM FVAFRGDVRA TMVASATLAF TQAELFGAMG
RFNVKLNGAS MANLIISTGV VNEFIAHMSR AFFSSDRRAG AAFASIAPAL FNAGVTTFLG
VIPSAFARYE YFRVYFFSQW CVILLFAVAN GVVFLPIALS LFA
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