Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_29275 |
Symbol | |
ID | 4999827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009355 |
Strand | + |
Start bp | 1114533 |
End bp | 1116210 |
Gene Length | 1678 bp |
Protein Length | 551 aa |
Translation table | |
GC content | 60% |
IMG OID | 640415248 |
Product | predicted protein |
Protein accession | XP_001415696 |
Protein GI | 145341190 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
TIGRFAM ID | [TIGR02765] cryptochrome, DASH family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACTT CATCGCCTCG TACGCGGGTG ATTGTTTGGT TTCGGAACGA CTTGAGGTTG TTGGACAACG CCGTCGTCGC TCGAGCGGCG GCTCTGCGCG GACAATCGGA CGCCGCTGAG GTCGTCCCGG TGTACGTGTT CGATGAGACG TTTTTTAAGA CATCCAAGCG CGGTCTCGCG CGCTTCGGTG CAGGGCGTGG GAAGTTTACG ATTGAGTGCG TGGACGACTT GAAGCGCGCG CTTCGCGGCG TCGGCAGCGA CTTGTTGGTG CGTTGCGGCA AGACGGAGGA TGTCATCACC GAGCTCACGC TCACGGGTGC GAACGACAAA ACGATCGTGC TCACGCAAAC AGAGGTGACG AGCGAGGAGA CTGATATGGA TAGGGCGGTA GAGAGGGCGT CGAAGGAGCG AGCTCGAAGC GGCGGCGCGT CGGCGTCGAT GGAGCGTCTG TGGGGGTCGA CACTTTACCA CGCCGACGAC CTCCCGTACG ACTTCGCCGG AGGTCTACAC GATTTACCAG ATGTGTTCAC GCCATTTCGG AACAAGGTAG AGTCAAAGTG CTCAGTGCGA GCGGTAGTGC CCGCGCCGAC GGCGAACGCT CTGGGAAGCG TACCGGCGTC CGTGGCGGGG TTGGATTGGA TGCCTGAACC GAAGGATTTG CCTTTCGCGT CGGCCGAAAT CGCCCCGGCG TGCGAAAAAT GGCTCAAAGA TGGCGCAGAC GAGCGCTCTG TGCTCGAATT CAAGGGTGGC GAATCCCAAG CCTTGGCTCG CGTCAAGTAT TATTTGTGGG ATAGCGATTT GCTCGCGACG TACTTTGAAA CTCGCAACGG GATGCTGGGC GGCGACTACA GCACCAAGCT CGCACCGTGG CTCGCCTTAG GATGTGTGTC GCCGCGCTAC GTCGTGAGCG AGATTCGACG CTACGAGAGC GCGCGCGTTG AGAACAAGAG CACGTATTGG GTAATATTTG AGTTGATATG GAGAGACTTC TTCAAGTTCT TCGCGCTGAA ACACGGGAAC AAAATCTTCC ATCTCGACGG TACGGCTAAC AGGACGGCAT CTTGGAAGAG TGATGAGAAG ATCTTGAAGG CATGGAAGAC AGGCACGACC GGATACCCAC TCATCGACGC CAACATGCGC GAACTCGCGG CGACTGGTTT CATGTCGAAT CGAGGGCGAC AAAACGTCGC CTCGTGGCTC GCCCTCGACG CCGGCGTCGA CTGGAGACAC GGTGCCGATT GGTTCGAGCA CCACTTATTG GATTACGACA CCGCTTCTAA CTGGGGGAAC TGGTGCGCCG CCGCCGGTAT GACGGGCGGT CGCATCAACC GCTTCAACAT CGCCAAGCAA ACCAAGGACT ACGATCCCTC TGGCGACTAC GTCAAGCGTT GGATCCCGGA ACTCCGCGAG ATCCCCGCGG CGTACATCAC CGAGCCCAAC CAAGCCCCTC GCGAGCTTCG CGATCGAATC AGTCTCGATT ACCCGAACAA GCTCAATCTC CCGAGGCGTG ACTTCACGGA AATGGGGTCT CCGCCCGGGC CGAAGCGCGG CGGCGGTCGC GCCGCCGGCG GCGGTCGAGG CGGTCGAGGC GGGCGTTCGA AATCTCGCGG CCCCAAGGCC CACGCCGTGA GCGTGTACGA CCACGTGTAC GGTTAATGTC GCGTTCGAGT CGAGTCTC
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Protein sequence | MATSSPRTRV IVWFRNDLRL LDNAVVARAA ALRGQSDAAE VVPVYVFDET FFKTSKRGLA RFGAGRGKFT IECVDDLKRA LRGVGSDLLV RCGKTEDVIT ELTLTGANDK TIVLTQTEVT SEETDMDRAV ERASKERARS GGASASMERL WGSTLYHADD LPYDFAGGLH DLPDVFTPFR NKVESKCSVR AVVPAPTANA LGSVPASVAG LDWMPEPKDL PFASAEIAPA CEKWLKDGAD ERSVLEFKGG ESQALARVKY YLWDSDLLAT YFETRNGMLG GDYSTKLAPW LALGCVSPRY VVSEIRRYES ARVENKSTYW VIFELIWRDF FKFFALKHGN KIFHLDGTAN RTASWKSDEK ILKAWKTGTT GYPLIDANMR ELAATGFMSN RGRQNVASWL ALDAGVDWRH GADWFEHHLL DYDTASNWGN WCAAAGMTGG RINRFNIAKQ TKDYDPSGDY VKRWIPELRE IPAAYITEPN QAPRELRDRI SLDYPNKLNL PRRDFTEMGS PPGPKRGGGR AAGGGRGGRG GRSKSRGPKA HAVSVYDHVY G
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