Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_27655 |
Symbol | |
ID | 5005439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009368 |
Strand | - |
Start bp | 670305 |
End bp | 672836 |
Gene Length | 2532 bp |
Protein Length | 843 aa |
Translation table | |
GC content | 61% |
IMG OID | 640420860 |
Product | predicted protein |
Protein accession | XP_001421527 |
Protein GI | 145354512 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGACA ATCGTCGACG CGCGCGCCGA GCGCTCGCGA GCGCGTTCAG CGCGCTCCGT CTCGACGTAG GCGCGTCCGA ACGCGATGTG AAGGCTGCGT ATAAAACGCT CGCACGAGCG CACCACCCGG ATAAGCCCGG GGGCGACGTC GAGGCGTTCC GCGCGATACA GCGCGCGTAC GAAACGATAA CGACAAAGTT TGAGCGCGAA CGCGCGGCGT TGGCGACGAT GGGGACCGCG GCATTCGGGT CGGGGACGAG GGGAGACGAG ACGCGCGAGC GAGACGCGCG CCGAAGAGAC GAGGTCGAGG TCGAGGTCGC GTTGGAGATA CGCCAAGGCG AAGACGGCGC TTCGATCACG ATGGGTGGAG ATTTGAAGGC GATCGGTGAC GCGCGGTACG AGGCTGGGGA GTATGAGAAG GCGATTGAAT GTTACACGGC GGCGGCGGCG TACGCGAAAG TGGACGGAAC GGCGGAATAC GCCGAGTTGT ACCACGCTCG AGGGATGGCG TACGCCAAAC TCGATCGCTG GCGAGAAGCG TGTGATGATG CCGATCGCGC CATCGGCGTT CGCGCTCTGT GGTTTCCTCC TTGGATTTTG AAGGGACGCG CGCTCGAGGC GCTCGGCGCG TGGTCCCGCG CCGCCGAGCT TTATCGCGAA TGCGTCGATC GAGCGACCTC AAGCGATGAC GACGAAGAGT TCTCAAGCGT TTTGATAGGG GGTTTGGCGC GGGTGGAGGC GAAGATGCTT CGCGAAGACA GAGTAGCGTC CATGCAAGCG CATCGAGGTC CCGTTATCGG TCTGGCGATG AAGCCTTCTT CGACGAATAT TGAGCGCGGC GGCGCGGAAA CGACGAACGC GTACGTCGCC ACAATCGGTG AGGATAACAA CTTGAAGTTA TTTAGCGTTC CTCAAGGTGA GTGCTTGTAC TCGACAAAGT TACCTCACGC GGTGAGTGAG TTGAAATGGT CGCCAGAAGG CGACGGCGAG CTCGTCGTCG CCGGCGTGAA CGGTTTCGTG AGTATTTGGA CATTTAATTT AACCGAACGA GGCGCCCCAA GCGCGTCAGT GGCGTCGACA AACGCACTTG TTGGATTCTC TCAGTCTGTC AACGTGACCG CGATCGACTT TGATCGTACC GGTGAGTTCG TTGCCGCGGG CGCGAGTGAC GGCTCGATTT GCGTCTGGGA CGTCGCGCAC GCCACGCTAG AGCTGGTCAT CCCTGCCGGA CTGAACGCGC ATAAACGCGA GATAACGTGT TTAGCGTTTC ATCCAACGCG TGGTCGCGCG CAGCTCACCA GCGGCTCTCT CGATGGCGAT GGACGAGTGT GGGATCTCGT CGCAGAAGCG ACGGAGACGG CGGGCGAGTG CCTGCACACG CTTCGCTGGA AATCAGGCGC CATCATCGAC GTGAACTACC TCTCCTGCGG TCGTCTCGTC GTCACGTCGA CGGCAATGTC CGCGTTGAAA GGCGCGTCGA GATCTCTGAA CAGACTTCTC GTGTGGAGCT CCGTGAGCGG ACGCTTGTGT AAGTGGTACG ACGCACACTC GAGCCGAATC TCGTCCTTCT CCTGGCATCC TCATCCTGGT TCGCGTAACG TCGCCGTGAC GGGTTGCGAT GACGGTGTGT TGCGTGTGTG GTCCATTCGA GCGTCCCCGA GCGGGGCTGG GAAACCTCTC TTGGAAAACA GCGATCATTC AGGCGTCATC GCGACGATGC GAGGCGTAGA CGTCGTGCGC TCGGGCGCCG TGGTCAAAGT GGCGCATTCT CCGATGGGTG GCCTCGTCGC TGTCGTCACA CGGGATGGTT TTTTGCGCGT ACACGATAGC GATACATTAG AAGCAACATC CAGTTGGCGC GCGAGCGGCG ACGGCGCGGT GACGCACGTG GCGTGGAGTC CAACGCCGAT CTCGCTTCGA TCGGGCGAGC GCCTGACCGC CGCGTCACCG TGGATGGTCG TCATCGGTGA CGAAGGCGGT CGAGTGAGCG TCTGGCGCGT TGCACGGAGT ACACATGATG ACAGCGATGA TGACGAGGAC GACGAAGTGG AGCAGACCGA ACATAATGAA GTCGACGTTG ATCAAACGGC GAACCGTTCG CTCGGCGGCG TCTACACGTC GCGAGACGTC AAGACTTGGT GGGACGAAAA GGAAAACACG AGCGAGGTCG CACCGAGTTG GACTGGCGTT CACGGCACAT ATCTCGGTGC CTCCGCGGGA GACAAACCGA TTTATAAAGC GTTGACCCTG GGCGAGGCTC CTGGACAAGT GTACGATCCG AGCCGACGCT CGGCGACGTA CGTAGACTTG TCCTTGCGCG ACGGTGAGAC GGCGTCGTCT GAAGCATACG ACGCGATCGA GACAAAGATA AGCGAGCTTC AGAGTGCGCG CGCGGAGTAC ATGCGCGATG ATTCGACATC TAGCGAAGAT AAGCGCGCGT ACAGCGCTCG ATTTGCGGCG GAGATGGAAC CCCTCCGCGC GGCGCGAGCG CGAGTGTACG CCGCGCTCAG AGCTCGCGGC GAATTTTCGT AA
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Protein sequence | MSDNRRRARR ALASAFSALR LDVGASERDV KAAYKTLARA HHPDKPGGDV EAFRAIQRAY ETITTKFERE RAALATMGTA AFGSGTRGDE TRERDARRRD EVEVEVALEI RQGEDGASIT MGGDLKAIGD ARYEAGEYEK AIECYTAAAA YAKVDGTAEY AELYHARGMA YAKLDRWREA CDDADRAIGV RALWFPPWIL KGRALEALGA WSRAAELYRE CVDRATSSDD DEEFSSVLIG GLARVEAKML REDRVASMQA HRGPVIGLAM KPSSTNIERG GAETTNAYVA TIGEDNNLKL FSVPQGECLY STKLPHAVSE LKWSPEGDGE LVVAGVNGFV SIWTFNLTER GAPSASVAST NALVGFSQSV NVTAIDFDRT GEFVAAGASD GSICVWDVAH ATLELVIPAG LNAHKREITC LAFHPTRGRA QLTSGSLDGD GRVWDLVAEA TETAGECLHT LRWKSGAIID VNYLSCGRLV VTSTAMSALK GASRSLNRLL VWSSVSGRLC KWYDAHSSRI SSFSWHPHPG SRNVAVTGCD DGVLRVWSIR ASPSGAGKPL LENSDHSGVI ATMRGVDVVR SGAVVKVAHS PMGGLVAVVT RDGFLRVHDS DTLEATSSWR ASGDGAVTHV AWSPTPISLR SGERLTAASP WMVVIGDEGG RVSVWRVARS THDDSDDDED DEVEQTEHNE VDVDQTANRS LGGVYTSRDV KTWWDEKENT SEVAPSWTGV HGTYLGASAG DKPIYKALTL GEAPGQVYDP SRRSATYVDL SLRDGETASS EAYDAIETKI SELQSARAEY MRDDSTSSED KRAYSARFAA EMEPLRAARA RVYAALRARG EFS
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