| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_27566 |
|---|
| Symbol | |
|---|
| ID | 5005280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009368 |
|---|
| Strand | + |
|---|
| Start bp | 522505 |
|---|
| End bp | 523732 |
|---|
| Gene Length | 1228 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | |
|---|
| GC content | 61% |
|---|
| IMG OID | 640420701 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001421306 |
|---|
| Protein GI | 145354044 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.298942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.129514 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CGCGACGCGC GAGCGAGGCG ACCGAGCGGG AAACGACGCG AGCGGGAGCG ATGCGCGCGA
CGGCGGGCGC GCTGGGCGGC GCGCGCGCGC GGTGCGAGCG CGCGATCGGC GCGCGATCGG
TGACGAAGAC GAGAAGCGCG CGACGGGGGG GGCGCGCGAC TCGCGCGGCG AGCGCGGCGG
AGCTGGCGAG CGAGGAGAAT AAGGACGTCA AGGTGCTCGT CGTGGGGGCG ACGGGGTACA
TCGGGAAGTA CGTGACGCGG GAGTTGTGCG CGCGCGGGTA CGACGTCACG GCGTTTACGC
GGGAAAAGAG CGGCATCGGC GGAAAGACGA ACGCGACGGA CGCGAAGGCG TTGTTCCCGG
ACGCGAAGGT GAAGTTCGGC GACGTTGGAA GCAAGGAGTC GATCGAGACG AAGGCGTTCG
ATGAGGGCGC GTACGACGTG GTGGTGTCGT GCCTGGCGAG CCGCACGGGC GGCGTGAAGG
ACTCGTGGGA TATCGATTAT CGCGCGACGA AGAACGTGTT GGACGTGGCG CGCGAGCGCG
GGAGCAAGCA CTTCGTTTTG TTGAGCGCGA TTTGCGTGCA AAAGCCGACG CTGACGTTCC
AAAAGGCGAA GCTTAAGTTT GAGGCTGAGT TGCAAGCGGC GGGGGATATT TCGTACACCA
TTGTGCGCCC GACGGCGTTT TTCAAGTCTC TCGCGGGGCA AGTCGAAGTG GTGCAAAAGG
GCGGCCCATA CGTCATGTTC GGCGATGGAC AATTGGCTTC GTGTAAGCCG ATCTCCGAGA
GCGATTTGGC CAAGTTTATG GCGGATTCTA TTCGCGAGCC GGAGATGTTG AACAAGGTGC
TCCCCATCGG CGGCCCGGGC GAGGCGATGT CGGCGCTTCA GCAAGGCACT ATGCTTTTTG
AACTCCTCGA AATGGAACCA AAGTTCATCA AAGTGCCGAT TGAAGTGATG GACGTCGCTA
TCAAGGTTCT CGATGTCTTC GCTGGCTTCT TTAGCAACAT GAAGGATGCG GCCGAGTTCG
GCAAGATTGG TCGATACTAC GCCGCCGAAT CGATGTTAGT GATGAACGAT GATGGTAAGT
ACGACGCCGC CGCGACGCCG AGCTATGGCT CGGACACACT TAAGGAATTC TTCGATAAGG
TGAGCAAGGA AGGTCTCGCG GGCCAAGAGC TCGGCGACCA GGCCGTTTTC AAGTAAACGC
TGTTTACTCG CGAAGAATTT CATTTATT
|
|---|
| Protein sequence | MRATAGALGG ARARCERAIG ARSVTKTRSA RRGGRATRAA SAAELASEEN KDVKVLVVGA
TGYIGKYVTR ELCARGYDVT AFTREKSGIG GKTNATDAKA LFPDAKVKFG DVGSKESIET
KAFDEGAYDV VVSCLASRTG GVKDSWDIDY RATKNVLDVA RERGSKHFVL LSAICVQKPT
LTFQKAKLKF EAELQAAGDI SYTIVRPTAF FKSLAGQVEV VQKGGPYVMF GDGQLASCKP
ISESDLAKFM ADSIREPEML NKVLPIGGPG EAMSALQQGT MLFELLEMEP KFIKVPIEVM
DVAIKVLDVF AGFFSNMKDA AEFGKIGRYY AAESMLVMND DGKYDAAATP SYGSDTLKEF
FDKVSKEGLA GQELGDQAVF K
|
|---|
| |