Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_27152 |
Symbol | |
ID | 5005166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009367 |
Strand | + |
Start bp | 289236 |
End bp | 291338 |
Gene Length | 2103 bp |
Protein Length | 700 aa |
Translation table | |
GC content | 53% |
IMG OID | 640420587 |
Product | predicted protein |
Protein accession | XP_001420960 |
Protein GI | 145353308 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.652588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.205318 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCGC GAGGTGAACG AGGGAACGCG CACGACGGCT ATCACGACAT CCAGAAGACG AACAAAGCGT TTGAGACGTA CTACAAAGCC CAGAATATCG TCCCGGAGAG CGAGTGGGAG ACGTTTTTGG ACTGCATGCG GTCGCCGTTG CCGATGACGT TTAGAATCAA TGGAAGTGGA AAGTTCGCGA CGGATATGCG AGACCAATTG GAGGGGACAC TGTTCGCGGA ATTGCTCAAA GAGGAATTGA AAGATGAGGA ACAAAATGAA TTACCGCCGC CGAAGCCGTT GGCGTGGTAT CCCGAGCGAT TGGCGTGGCA GTGTAGTTAT ACGCGAGCGC AGTTGCGACG GTTGCCGGCG CTGCAAGGAA TTTTCGACTT CATCAAGAAC GCTAACGAGC TCGGGTCGAT CTCTAGGCAA GAGGCAGTAT CGATGATTCC TCCGTTTTTC TTGGATGCGC AACCGCATCA TCGAATTTTG GACATGTGCG CGTCGCCGGG AAGCAAGACG TTTCAGATTT TGGAACGCAT GCACGGTGAT TTTGACGGCA ACACCAAGCT TCCCACCGGA ATCGTCGTCG CCAATGACGT CGATTTGAAG CGTTGCAACT TACTGACGCA TCAAACGAAG CGAGCGAACT CACCGACGTT ACTCGTGACC AATCATGAAG CGCAAAACTA TCCCATCATC AAAGGCCCAA AGGGTGAACT CTTCGACTTT GACGCCATCC TGTGCGACGT ACCGTGCTCG GGCGACGCGA CGATGCGCAA GGCACCGGAT ATCTGGAACA GATGGACTCC TGGTAATGGT AACGGTTTGC ATACCTTACA GCTTAGAATC GCTGCTCGCG GTGCTCAGCT CCTCAAGGTG GGCGGTCGTC TCGTGTACAG CACGTGCTCG CTGAATCCGA TTGAAAACGA AGCTGTCGTG GCGGCGTTGT TGAAGGAATG CGATGGTGCT TTGGAGCTTC TCGATGTGAG TGACGAATTG CCAGACTTGA AGCGTAGCCC TGGATTGCGC GATTGGCAAG TGTGGGATAA GTTTGGCTAT CACCCAAGCT TTCGAGGCGA GGAGCAAATG TTCAAGCTCT GCGAGACGAT GTTCTCCGAC GAAGAGACGA AGAAACTGCC GTTGGAGCGA TGTCTGCGAC TTTTGCCTCA TCATCAAGAC ACTGGTGGAT TCTTTGTCGC CGTATTCCAG AAAGTTAAGC CCATGGAGAT CAAAGAAGAC GTGAACGCAA AGAAGCAAAC TGTGAAGGAG CGTGTTCGCC TTTCGCTCAA CGTGAACGCG AAGAACGAGA TCGAGATGTC ACATGAGGTG ATCACGTTGG CCCGCAAGGG TCAGACTGCG TCTATACCTC CGGAAGTCGA CGACAAAGGC GAGTATTTGC TCCCACACAG AGGCGCGACG GGTCCGAACG GGGGCAGTCG ATGGCTCGGC ATCGATCCTG TGCTTCCGGT GAACGATCCG AAGGTGATCA ATAGCATCTA CAGTGTCTAC GGTATCGAAA GCGATGACAT TGCGTTACAC AAAAATTGTG TCACACGCAC TGCGGACACT TCACGACCGA AGCGTGTGTA CACCATCACC GACTCCTTGC GCCAGTACTT AGCGTGCGAC GTCAACGAAA GTCTTCGCGT GACGTCGTGC GGGCTCAAGG CGTTCGAGCG CCAGGAAATC AAGGATGAAG TCAAAGAACA AGAAGAAACT TCTGGTGCGA TGTGTGATTT CCGTCTCACG CAAGACGGAA TACCGATGAT GTTCCCGTTC GTGAGAAAGC GCATCATTCG CCCGACTTTT GACGACTTTA AAGCCATCCT TGAACGTCGC ACGTTGGCGT TTGAGTACAG CGCAGAGGCG CCGCAACGCG CCGTCATCTC TTGCGCCGAA ACCAAAAAAG CCTTGCTCGA TCTCACTTTG GGATGCTGCA TTCTCGTTCC TCGCGATGAA GATCTGGCCG CCATCAACGT CAGCAAGGCG GACCTCGCCA TCGCGTGCTG GCGCGGTCGC ACGTCATGCA ACTTGTTGGT CTCCAAAGCC GAAACAATTC ACTTCATCGA TAAAATCAAA GTCAACGCGG CGGTGAAGAT GGACACGTCG TGA
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Protein sequence | MDARGERGNA HDGYHDIQKT NKAFETYYKA QNIVPESEWE TFLDCMRSPL PMTFRINGSG KFATDMRDQL EGTLFAELLK EELKDEEQNE LPPPKPLAWY PERLAWQCSY TRAQLRRLPA LQGIFDFIKN ANELGSISRQ EAVSMIPPFF LDAQPHHRIL DMCASPGSKT FQILERMHGD FDGNTKLPTG IVVANDVDLK RCNLLTHQTK RANSPTLLVT NHEAQNYPII KGPKGELFDF DAILCDVPCS GDATMRKAPD IWNRWTPGNG NGLHTLQLRI AARGAQLLKV GGRLVYSTCS LNPIENEAVV AALLKECDGA LELLDVSDEL PDLKRSPGLR DWQVWDKFGY HPSFRGEEQM FKLCETMFSD EETKKLPLER CLRLLPHHQD TGGFFVAVFQ KVKPMEIKED VNAKKQTVKE RVRLSLNVNA KNEIEMSHEV ITLARKGQTA SIPPEVDDKG EYLLPHRGAT GPNGGSRWLG IDPVLPVNDP KVINSIYSVY GIESDDIALH KNCVTRTADT SRPKRVYTIT DSLRQYLACD VNESLRVTSC GLKAFERQEI KDEVKEQEET SGAMCDFRLT QDGIPMMFPF VRKRIIRPTF DDFKAILERR TLAFEYSAEA PQRAVISCAE TKKALLDLTL GCCILVPRDE DLAAINVSKA DLAIACWRGR TSCNLLVSKA ETIHFIDKIK VNAAVKMDTS
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