Gene OSTLU_26838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_26838 
Symbol 
ID5004907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009366 
Strand
Start bp279457 
End bp280224 
Gene Length768 bp 
Protein Length255 aa 
Translation table 
GC content61% 
IMG OID640420328 
Productpredicted protein 
Protein accessionXP_001420647 
Protein GI145352641 
COG category 
COG ID 
TIGRFAM ID[TIGR01557] myb-like DNA-binding domain, SHAQKYF class 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.05817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.063601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTGT ATCCGGCGGT GTACGGGGCG TACGATGCGA TGCGAGCGAT GTCGCCGATG 
ACGTACGACG CGTACGCGGG CGCGGCGCGC GCGGTGGCGG TGCCGGGGGA TTCGTTTTCG
AGACAGATTC AGGAGCGGGC GTACGCGAGC GCGTTTACGT TTACGCGGCA GTGGAATTAT
TTGCAACACG CGGCGGCGGC GCAGCACGCG GCGTTCGCGT CGGGGAGTCG TGGGGGTGGA
ACGATGATGG ATCTTCTCGC CGCCACCGGT TCGGCGGCGG CTGAGCGCGA TATCGGCGTC
GAGCGCGAGG TGGAGCTGAG CAAGCGACAG CGGTTGGTGT GGACGCCGCA ACTGCACGCG
CAATTCATCG CGGCGGTGCA AAAGCTCGGG GTTAAGACGG CGGTGCCGAA GGCGATTATG
AAAATAATGA ATGTCAAAGG GTTGACGCGT GAAAACGTCG CTTCGCATTT GCAGAAGTAT
CGTCTGACGC TCAAACGAGC GCAGGATAGC TCTGAATCGA CCCGGGCGTC GGGAGACGCG
ACAGACGCGA AGAGAAGCGA CGTCCGCGCG GGACGTAAGA GGAAAGATCG CGAAGAAAAA
GGTAAAACCA ACAGTGGAAG CGGCCAGGGA AGCGGCCAGG GAAGTGACGG TGGAAGTGCC
GAGCATAGCG CGAGTGAAAA CCTCGAGAAT CGCGCCAAGC GAATTTCTTC CAGCGAAGAA
GAAGAGACGC GACAAATTAC GCTCGCCGTC GACCACAACG ACGAATAA
 
Protein sequence
MTVYPAVYGA YDAMRAMSPM TYDAYAGAAR AVAVPGDSFS RQIQERAYAS AFTFTRQWNY 
LQHAAAAQHA AFASGSRGGG TMMDLLAATG SAAAERDIGV EREVELSKRQ RLVWTPQLHA
QFIAAVQKLG VKTAVPKAIM KIMNVKGLTR ENVASHLQKY RLTLKRAQDS SESTRASGDA
TDAKRSDVRA GRKRKDREEK GKTNSGSGQG SGQGSDGGSA EHSASENLEN RAKRISSSEE
EETRQITLAV DHNDE