Gene OSTLU_26597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_26597 
Symbol 
ID5004422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009365 
Strand
Start bp498547 
End bp499510 
Gene Length964 bp 
Protein Length228 aa 
Translation table 
GC content66% 
IMG OID640419843 
Productpredicted protein 
Protein accessionXP_001420528 
Protein GI145352382 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0296389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TCGCGCGCGC GCCATGGCGA TCGCGCGCGC GCGCGCGAGC GCGTCGAGGG GCTGCGTCGC 
GACGCCGTCG ACGTCGCGCG CGCGCGCGAG GGCGCGCGAG AGCGTCGCGA GGGCGTTTCA
ACGCGTCGAG GGGGACAAGC GCGTCGAGGT GCGCAAAAGT GCCGCGCCTC GGACGCGCGA
AACGGCGCGC GCGAGGGCGA ACGCGCGCGT CGAGGCGAAA GGGGGACGAA ACGATTCGTT
CCCAGACGTC CCGGGGCTGC CGGACGCGGA AGCGCTGATG GCGAAATACG CCGGGGACGC
GGCGCGAGGG GCGGCGCGGG CGGCCAAGGG CGCGCTGCGC GGCGCCGGAC CGTCGCGACG
GACGGCGGCG TACGACGGCG TGTTCGCGCT GCTGTTCATA AACTTTGCGT TGTTCGCGTG
CGATCACTGG GCGCACATGG CGTTCGTGAA GACGCTGTAT TTGAATCACG CGAAACCGAC
GTGGTGGCAG TTCGCGACGT CGACGTTTTG TCACGCGAAC TGGGCGCACT TGAGTTCGAA
CATCTTTTTT TTGTACATCT TCGGGAAGCT GGTGGAGGAA GAGGAGGGAG CTTTCGGGGT
GTGGATGTCG TATCTCGTCA CCGGGATCGG GGCGAACGTG GCGTCGTGGT TGTTGTTGCC
TAAGAGCGTC GGAGGCGTGC TCGGCATCGG CGGCGCGGCG ACGGTGAGTT TGGGCGCCTC
GGGCGCTGTG TTCGGGCTGT TCGCGGTGAG TGTGTTGGTG AAATTGAGCT GGAACTGGCG
AAGATTGTTA GAAGTGGTGA TTCTCGGGCA ATTCGTGGTC GATAGATTTC TGAGTGAGGC
GAAAATGGTC GCCGCGGCGG GGAGCGGCGT CGGCGCGGGC AACGTCAATC ACGTCGCGCA
CCTCGGCGGC GCGTTCGCGG GTGTTTTATT GATCTTCTTT CTCACGCGCA TGGTTCCACC
GTGA
 
Protein sequence
MAKYAGDAAR GAARAAKGAL RGAGPSRRTA AYDGVFALLF INFALFACDH WAHMAFVKTL 
YLNHAKPTWW QFATSTFCHA NWAHLSSNIF FLYIFGKLVE EEEGAFGVWM SYLVTGIGAN
VASWLLLPKS VGGVLGIGGA ATVSLGASGA VFGLFAVSVL VKLSWNWRRL LEVVILGQFV
VDRFLSEAKM VAAAGSGVGA GNVNHVAHLG GAFAGVLLIF FLTRMVPP