| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_26544 |
|---|
| Symbol | |
|---|
| ID | 5004513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009365 |
|---|
| Strand | - |
|---|
| Start bp | 421771 |
|---|
| End bp | 422349 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | |
|---|
| GC content | 67% |
|---|
| IMG OID | 640419934 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001420503 |
|---|
| Protein GI | 145352331 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5574] RING-finger-containing E3 ubiquitin ligase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.295366 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0215447 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCGG ACGCGAGCGC GACGACGTCG GGGCGAGCGA CGACGTCGGC GCGGGGACGA
GGGCGCGGCG ACGGGGCGAC GACGACGCGA GACGCGGGCG AGGACGAGGG CGCGCGGAGA
CGTAGCGCGG GCGCGGTGAG GCGAACGTCG CGCGCGTCGT TCGATTCGGA CGTCGCGCGA
GGCGATGGGG AGGGAGGAAC GAAGGAAAAA TTTGAGTGCA ACGTGTGCTT CGAAGTCGCG
CGGGAGCCGG TGGTGACGCC GTGCGGGCAC TTGTACTGCT GGCGATGCAT CAACACGTGG
CTGAGCGTCG GCGATAACGT GGCGTGCCCG GTGTGCAAGG GAGAGATGAC GAAGGATATG
TTGATCCCGC TGTACGGGTT CGGGGCGAAC ACCGCGAGGG GGGGGGCGAA GCGCGAGGGA
GGCGGCGCGC CGCCGCTGGA ATCGGCGGCG GGACTGGCGA CGTTGCTGGG TTTGAGGAGC
AGCGACGAAT TGAGCACGGA ACAGGCGAGT CAGTTGCTGC TATCGCGATA TCTGCTCGCC
ATCGGAACCC TGGTGATCGT GTGCTTACTG GTCATCTGA
|
|---|
| Protein sequence | MDADASATTS GRATTSARGR GRGDGATTTR DAGEDEGARR RSAGAVRRTS RASFDSDVAR
GDGEGGTKEK FECNVCFEVA REPVVTPCGH LYCWRCINTW LSVGDNVACP VCKGEMTKDM
LIPLYGFGAN TARGGAKREG GGAPPLESAA GLATLLGLRS SDELSTEQAS QLLLSRYLLA
IGTLVIVCLL VI
|
|---|
| |