Gene OSTLU_26496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_26496 
Symbol 
ID5004602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009365 
Strand
Start bp334604 
End bp335338 
Gene Length735 bp 
Protein Length244 aa 
Translation table 
GC content56% 
IMG OID640420023 
Productpredicted protein 
Protein accessionXP_001420311 
Protein GI145351927 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG5593] Nucleic-acid-binding protein possibly involved in ribosomal biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0091777 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.186694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACGA CGCCCGAAAA GGTGGTGACG ATGTACTTGG ATGAAAAGTT TAAGTCGGCG 
ACGGTCGAGG GGGAACTTTT GGCCAAGTGT GAAAACTTGA AGACGCTGTC GTGCGCGTCG
TGCGGGTTGA CGACGCTCGC GGGGTTCCCG GCGCTGGCGA ATTTGAAGGA TTTGAGTTTG
AACGATAATC GCATCGCGGA TGGGTTGGAA GCCTTGGTGG GGTGCAAGGC GCTCTCGTCG
TTGTCGCTGG CGAATAATAA GCTGGCGAAC GTGGACGATT TGAAAGCCGT GGCGGAGGAG
TTGACGCTGT CGGTGCTCGA GTTGGAGGCG AATCCGTTGA CGGAGAACGA AGACTATCAC
GAAAAGGTCA TGACCATGAT GCCCACGCTT AACGTGTTGG ACGGAAGGGA CGAGTTCGGG
AATGAGATCG AAGACGACGA CGAAGACGAC GACGAAGACG AAGACGACGA AGACGACGAA
GACGAAGACG AAGACGACGA TGAAGACGAC GAAGACGCAG ACGAAGACGA AGACGAAGAC
GAGTCCGAGG AAGAGGAAGA GGAAGAGGAA GAGGAGATGG GCTTAGCCGA TCTCTACGGC
GACAAGCCGC TCGAAGACGA CGACGACGAC GACGACGCTT TCGTCGAAGA CGAAGATCCC
GAGAGCGAAG ACATCGACGA AGAGGAGTCG GACGACGACG AAGACGAAGC GGCGGCGAAA
AAGCCCAAAA TATAA
 
Protein sequence
MGTTPEKVVT MYLDEKFKSA TVEGELLAKC ENLKTLSCAS CGLTTLAGFP ALANLKDLSL 
NDNRIADGLE ALVGCKALSS LSLANNKLAN VDDLKAVAEE LTLSVLELEA NPLTENEDYH
EKVMTMMPTL NVLDGRDEFG NEIEDDDEDD DEDEDDEDDE DEDEDDDEDD EDADEDEDED
ESEEEEEEEE EEMGLADLYG DKPLEDDDDD DDAFVEDEDP ESEDIDEEES DDDEDEAAAK
KPKI