Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_26251 |
Symbol | |
ID | 5004106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009364 |
Strand | + |
Start bp | 492523 |
End bp | 494523 |
Gene Length | 2001 bp |
Protein Length | 666 aa |
Translation table | |
GC content | 58% |
IMG OID | 640419527 |
Product | predicted protein |
Protein accession | XP_001420016 |
Protein GI | 145351291 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5540] RING-finger-containing ubiquitin ligase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.305353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.554527 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGACG CGCGCCCGAC GCGACGCGCC GTTCACGCGA GTTCGCGAGA TCGTCGAGCC GATGGTTCGT CGTCGGACGA CGACGACGAC GGCGTCGACG CCTTCATCCT TCGCGAGACA AAGTCTCGAG GCTGGGACGA ATTCCGAAGC CTTCTCGACG ACGTGCGCGC GTACAGACGC CGCGACGTCG ACGCCGACGA CGCCGACGCC GCGCATGCGT TCACGAATGA CGACGCGGAC GCGCGGTTGC CGATCGGGAA GAGCTACATC GATGGCGTGT ACGCGCTCGC GGGCTCGAGC GGGACGGGAC GGGACGGACG CGAGTTGACG CCGGCGTGGC CGTTACTCAC GTACGCGCTC GCGACGCGCG GCGACGGCGG AGAGAACGAG AGTAGTGGAG GCAAGGGCGC GTCGACGTCG ATGGGGTCGA CGGTGATGGG GACGACGCCG CCGAGGCGGA CGAGCTTCGA TACGCGAGAG CACGCGGAGC GACACGCGAG ACGCGTGCAA GGGTTACACG CGGGCGGTCT CACCGCGGCG TTGGGGTACT CGCGGATGGA GCTGGCGACG CTGGGGAACG TCGAGAAGCG AAGGGCGTTC GGAGAGTTGT ATAGGGATCC GTCAGAGTGC GTGCGGCATC TATGCTCGCC GGGACGGGTG TGGGAAGGAA CGATTTCTAT TCCCGGGTCG GGGGACGAAG AGGCGACCGG GTCGCCTTAC GCGTTTCAAG TGCTGTGGTT CGATGCTGCT GCGGGAGCGT TCTTGGTCTC ACACACCGCG CAAGGGGACG AGCAGTTGTG CCACTTGACG TTGCACGACG ACGGTAAAAG CGGGACGATG GCGCTTTCGT TTGCGGATAA CGAGACGTAT TGCTCTGGCA CGATTGACGG GGCGACGGGG ACGATTTCCG GAACCGTCGG ACAGTTATTG CGTGCAGAAG AGGGATTCTT TGAACGAGCG GATTCGTTGC GGAACACGTT CTTGCTGAAA CCGGTTGACA TCGACGACTC GACCAACGAA GTGGACGCAT CGCTTGAACC AGAGCGTCGG GAACAGATCT CTCGCGTGAT GCGGCGACGC AAACTTATCG CACAGTGGAG TCGTAGTGCA AACGTTCTAT CTGCGACGTA TCGCGTGATA CAATTCATCA AGGATACGAT GCGGAGCGAA CACATGTGGA ATTACATGTT GCGAAAGATC ACGTTCGAGA CGAAACTCAT GCGTTTGGAG CAGACGAATG ACGCACAATC GCGCGCATTC GCAGCGGCAG CGGTGGCGGC GGGAAGACAA ACGACTGGTG AGTCTGCAAT TGATTCATAT GAGATGGCGC CTGAATCTAC GGAGCAGCTC TTACAAGATC AAATGAATCG TTTGATGCGT CGACCAACTC AAATGCTCTG GACGACATTT CCGTCGCCCG GATTGGAAGC GATCGCACTC GGGCCCGCTG AGATCGATTG GTGCGATATT TGGACGATAG AAAGAATGAA CGCCGAGTTG TTGGGATGCA AATTTCGAAT GTATACTCGC TTGTTGCGCG CTCGTGTCTT CCAGACGAGC AAGGAAAAGC AACAGTATCT CAGTGAGTTT AAAACGTTGC GGTCCGAATG TCACAATGAA ATGAATCGCG TTCTAAGTAA CATGAATCTT TTACTTTGGC GTCTCTTCTA CGGAAGTGAT ATGCCCAGAA ACGATCGACA GGCGCTCGTG AAAAACATGG TGGGAATTTT GCGTGTTGAA GAGGCACGCA TGATCATCGC GTACGATAAC GTCGACAAAG CGCTTCGCGA ATGCGACGCC CGGCTCCCCA TCAATGCGAT TAAACAAAGA TGCTCGATCG CGGGCGACGA GTCGTACACG TGTTCGATCT GTTTGTTGGA AATCGAGCGC GGCGAGGAGG TGCTTACGCT CGATTGCTCG CACAGTTTTC ATCTTCCATG TTGCTCGACG TGGCTGCACA CGCATGCAAC ATGTCCCAAC TGCCGCACGG TTTTGTCTTA G
|
Protein sequence | MRDARPTRRA VHASSRDRRA DGSSSDDDDD GVDAFILRET KSRGWDEFRS LLDDVRAYRR RDVDADDADA AHAFTNDDAD ARLPIGKSYI DGVYALAGSS GTGRDGRELT PAWPLLTYAL ATRGDGGENE SSGGKGASTS MGSTVMGTTP PRRTSFDTRE HAERHARRVQ GLHAGGLTAA LGYSRMELAT LGNVEKRRAF GELYRDPSEC VRHLCSPGRV WEGTISIPGS GDEEATGSPY AFQVLWFDAA AGAFLVSHTA QGDEQLCHLT LHDDGKSGTM ALSFADNETY CSGTIDGATG TISGTVGQLL RAEEGFFERA DSLRNTFLLK PVDIDDSTNE VDASLEPERR EQISRVMRRR KLIAQWSRSA NVLSATYRVI QFIKDTMRSE HMWNYMLRKI TFETKLMRLE QTNDAQSRAF AAAAVAAGRQ TTGESAIDSY EMAPESTEQL LQDQMNRLMR RPTQMLWTTF PSPGLEAIAL GPAEIDWCDI WTIERMNAEL LGCKFRMYTR LLRARVFQTS KEKQQYLSEF KTLRSECHNE MNRVLSNMNL LLWRLFYGSD MPRNDRQALV KNMVGILRVE EARMIIAYDN VDKALRECDA RLPINAIKQR CSIAGDESYT CSICLLEIER GEEVLTLDCS HSFHLPCCST WLHTHATCPN CRTVLS
|
| |