Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_15280 |
Symbol | |
ID | 5002069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009359 |
Strand | + |
Start bp | 59592 |
End bp | 61196 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | |
GC content | 57% |
IMG OID | 640417490 |
Product | predicted protein |
Protein accession | XP_001417659 |
Protein GI | 145346364 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGTCCA TCGCCGGCGT GGACGACACG CTGGACGTCG ACGCGACGGA CGTGGTGAAA ATCATCCTGC AGTGGGCGAG AGAATCCGGA CTCGACGCCA CGCACGCGGC GCTGTCCGCG GAGACGAACA CGTCGTTGAA CGCGATTGAA GACGTGGATG CGTTTAAACG CGACGTCACG CACGGAAGGT GGGACGCGGT GCTGCCACAG TTGGCGAAAC TGCGACTGCC CAAGAATGTG CTGGAGGATG CGTACGAGCA CGTGACGCTG GAGATGTGCG AACTGGGTGA ACAAGACACC GCACGGGCGA TTCTGAGGCA ATCAAACGTC ATGCGAGTGA TGAAAGAGGA ACAGAGTCGG CGGTACGGAC GATTAGAGCA TTACGTGAGC GCGAGGACGT TCACCGCGGA GGACGCGTAC GCGGGGACGA CGAAGGAAAA GCGACGGGAA AAGTTAGCCG AGGCGCTCTT GCGAGAGGTG GTCGTCGTGC CGCCGTCGAG ATTGTTGGCG CTCATCGGCC AGGCGTTGAA ATGGCAGAAG AGCACTGGGG CGCTGCCGCC TGGGACGGCG TTTGATTTGT TTCGAGGCCA AGCGCAGGTG GAGGAGGAAG AGGAAGAGCA GTGTCCGACG ACGTCGCACA AGAGGATCAA GTTTTCCAAA AAGTCCTTCC CCGAGTGCGC GCGATTCAGT CCTTGCGGTG GTATGTTGGC CACGGGTTCG GCGGATGGAT TCATAGAGAT TTGGGATCCG TACAGTGGTA AGTTGAGAAA GGATTTGAAG TATCAGGCGG AGGATACGTT GATGATGCAC GACGACGCCG TGCTCGCGCT CGCCTTTAGC CAAGACTCCG ATATGCTCGC TTCGGGTTCA CAAGATGGTA AGATCAAGGT CTGGCGCGTG AGCACGGGTA CGTGTTTGAG AAAATTCGAA AAAGCTCATC AAGGCGGCGT CACGAGCGTC ACCTTTAGCA AGGATGGTTC GCAGGTGCTC AGCGGATCTT TCGACGGTCT CGTTCGAGTG CACGGATTAA AGAGCGGTAA ATTATTGAAA GAGTTTAGAG GGCATACGTC GTATGTGAAC TCGGTGGCTT TCACAGAAGA TGAGACGGAT GTCGTCTCTG CGTCGAGCGA CGGTTCAGTC AAGGTCTGGG ACGCGAAGAC GTCCGAGTGC AAGTGCACTT TCAAGCCGCC ACCGCCGGTT AATCCGAACA AAGACGATGA CGAAGAGACA TATCAAACTG GTACAGTCCC AGCCGTGTTG TCTGCGATTC CACATCCGAA AAATGACGCA CAAATTATCG TCACTTCGAA ATCAAACGCC GTCGTCGTGT GCACGCTCGC GGGCGACGTC GTGGAAACGT ACTGGACGAA CAAGACCGCG CTACCGCACA CCATCGTCGC GGCGACGCCT TCACCGCGAG GTGAATGGAT TTACGCCACG AGCGAAATCG GTGAACTGTA TTGCTTTAGC ACCGAAACCA AAAAGCTCGA GTCCACCGTC TTCAACCTGC ACGAGAGCTC CACGCTCGGC GTCGCTCACC ATCCTCGAAG AAACCTCGTC GCCACGTTTA GCTCTATCGG CGAACTCAAG ACTTGGAAAC CGTGA
|
Protein sequence | MASIAGVDDT LDVDATDVVK IILQWARESG LDATHAALSA ETNTSLNAIE DVDAFKRDVT HGRWDAVLPQ LAKLRLPKNV LEDAYEHVTL EMCELGEQDT ARAILRQSNV MRVMKEEQSR RYGRLEHYVS ARTFTAEDAY AGTTKEKRRE KLAEALLREV VVVPPSRLLA LIGQALKWQK STGALPPGTA FDLFRGQAQV EEEEEEQCPT TSHKRIKFSK KSFPECARFS PCGGMLATGS ADGFIEIWDP YSGKLRKDLK YQAEDTLMMH DDAVLALAFS QDSDMLASGS QDGKIKVWRV STGTCLRKFE KAHQGGVTSV TFSKDGSQVL SGSFDGLVRV HGLKSGKLLK EFRGHTSYVN SVAFTEDETD VVSASSDGSV KVWDAKTSEC KCTFKPPPPV NPNKDDDEET YQTGTVPAVL SAIPHPKNDA QIIVTSKSNA VVVCTLAGDV VETYWTNKTA LPHTIVAATP SPRGEWIYAT SEIGELYCFS TETKKLESTV FNLHESSTLG VAHHPRRNLV ATFSSIGELK TWKP
|
| |