Gene OSTLU_15280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_15280 
Symbol 
ID5002069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009359 
Strand
Start bp59592 
End bp61196 
Gene Length1605 bp 
Protein Length534 aa 
Translation table 
GC content57% 
IMG OID640417490 
Productpredicted protein 
Protein accessionXP_001417659 
Protein GI145346364 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCCA TCGCCGGCGT GGACGACACG CTGGACGTCG ACGCGACGGA CGTGGTGAAA 
ATCATCCTGC AGTGGGCGAG AGAATCCGGA CTCGACGCCA CGCACGCGGC GCTGTCCGCG
GAGACGAACA CGTCGTTGAA CGCGATTGAA GACGTGGATG CGTTTAAACG CGACGTCACG
CACGGAAGGT GGGACGCGGT GCTGCCACAG TTGGCGAAAC TGCGACTGCC CAAGAATGTG
CTGGAGGATG CGTACGAGCA CGTGACGCTG GAGATGTGCG AACTGGGTGA ACAAGACACC
GCACGGGCGA TTCTGAGGCA ATCAAACGTC ATGCGAGTGA TGAAAGAGGA ACAGAGTCGG
CGGTACGGAC GATTAGAGCA TTACGTGAGC GCGAGGACGT TCACCGCGGA GGACGCGTAC
GCGGGGACGA CGAAGGAAAA GCGACGGGAA AAGTTAGCCG AGGCGCTCTT GCGAGAGGTG
GTCGTCGTGC CGCCGTCGAG ATTGTTGGCG CTCATCGGCC AGGCGTTGAA ATGGCAGAAG
AGCACTGGGG CGCTGCCGCC TGGGACGGCG TTTGATTTGT TTCGAGGCCA AGCGCAGGTG
GAGGAGGAAG AGGAAGAGCA GTGTCCGACG ACGTCGCACA AGAGGATCAA GTTTTCCAAA
AAGTCCTTCC CCGAGTGCGC GCGATTCAGT CCTTGCGGTG GTATGTTGGC CACGGGTTCG
GCGGATGGAT TCATAGAGAT TTGGGATCCG TACAGTGGTA AGTTGAGAAA GGATTTGAAG
TATCAGGCGG AGGATACGTT GATGATGCAC GACGACGCCG TGCTCGCGCT CGCCTTTAGC
CAAGACTCCG ATATGCTCGC TTCGGGTTCA CAAGATGGTA AGATCAAGGT CTGGCGCGTG
AGCACGGGTA CGTGTTTGAG AAAATTCGAA AAAGCTCATC AAGGCGGCGT CACGAGCGTC
ACCTTTAGCA AGGATGGTTC GCAGGTGCTC AGCGGATCTT TCGACGGTCT CGTTCGAGTG
CACGGATTAA AGAGCGGTAA ATTATTGAAA GAGTTTAGAG GGCATACGTC GTATGTGAAC
TCGGTGGCTT TCACAGAAGA TGAGACGGAT GTCGTCTCTG CGTCGAGCGA CGGTTCAGTC
AAGGTCTGGG ACGCGAAGAC GTCCGAGTGC AAGTGCACTT TCAAGCCGCC ACCGCCGGTT
AATCCGAACA AAGACGATGA CGAAGAGACA TATCAAACTG GTACAGTCCC AGCCGTGTTG
TCTGCGATTC CACATCCGAA AAATGACGCA CAAATTATCG TCACTTCGAA ATCAAACGCC
GTCGTCGTGT GCACGCTCGC GGGCGACGTC GTGGAAACGT ACTGGACGAA CAAGACCGCG
CTACCGCACA CCATCGTCGC GGCGACGCCT TCACCGCGAG GTGAATGGAT TTACGCCACG
AGCGAAATCG GTGAACTGTA TTGCTTTAGC ACCGAAACCA AAAAGCTCGA GTCCACCGTC
TTCAACCTGC ACGAGAGCTC CACGCTCGGC GTCGCTCACC ATCCTCGAAG AAACCTCGTC
GCCACGTTTA GCTCTATCGG CGAACTCAAG ACTTGGAAAC CGTGA
 
Protein sequence
MASIAGVDDT LDVDATDVVK IILQWARESG LDATHAALSA ETNTSLNAIE DVDAFKRDVT 
HGRWDAVLPQ LAKLRLPKNV LEDAYEHVTL EMCELGEQDT ARAILRQSNV MRVMKEEQSR
RYGRLEHYVS ARTFTAEDAY AGTTKEKRRE KLAEALLREV VVVPPSRLLA LIGQALKWQK
STGALPPGTA FDLFRGQAQV EEEEEEQCPT TSHKRIKFSK KSFPECARFS PCGGMLATGS
ADGFIEIWDP YSGKLRKDLK YQAEDTLMMH DDAVLALAFS QDSDMLASGS QDGKIKVWRV
STGTCLRKFE KAHQGGVTSV TFSKDGSQVL SGSFDGLVRV HGLKSGKLLK EFRGHTSYVN
SVAFTEDETD VVSASSDGSV KVWDAKTSEC KCTFKPPPPV NPNKDDDEET YQTGTVPAVL
SAIPHPKNDA QIIVTSKSNA VVVCTLAGDV VETYWTNKTA LPHTIVAATP SPRGEWIYAT
SEIGELYCFS TETKKLESTV FNLHESSTLG VAHHPRRNLV ATFSSIGELK TWKP