Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_15174 |
Symbol | SDG3512 |
ID | 5001243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009358 |
Strand | - |
Start bp | 760377 |
End bp | 761138 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | |
GC content | 61% |
IMG OID | 640416664 |
Product | predicted protein |
Protein accession | XP_001417594 |
Protein GI | 145346226 |
COG category | [R] General function prediction only |
COG ID | [COG2940] Proteins containing SET domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.000235527 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAACG CGCGATCGAG GTGCGAGTGG TGCTTGCGGG CGTCCGCGGG CGGGGCGACG TGCGAATCGT GCGCCGACGC GCGTCGATTG GCGTACGGCG ATTTCGAAAA GACGCACGGG GTGGATTTGA GCGAGCTCGA AGCGTACTGC GAAAAGAATG GTGGTTTAAA ATTTCCTTTG ATCACCGCCA GAGCGGCGTC TATGATCGCC AGCGGAGCGT TGAACAAGAG CACGCTGGAA TGGTTGTGCG CGGCGAACGA CGTGGAAACC AATCCGCCCG CGCAGTGGCT CGAAGAGTGC GATGTGTTGC GACGAGCATT CGGCGACGCG GGGAAAGATA TCATCACACC CGCGTGGTAC GCCGGAATCA CGTCCCGTCT TCATTTAAAC TCGTTCCGAG TGGAAATTCC AGTCGACGCC GCGGCGTCGA CGACGGATTT CAAGGACGTC CTATCCGCCG GATTGGACGC CATCACGCAA GGCACCGCGT CGGGTTCGGC GGTATACAAG TACGTGTCCC TACTCAATCA CTCGTGCGCG CCCAACTGTC ACACGCACTG GGAAAACGGC GATTCGTCGC TCACGATTCG CGCGCTTCGC GAAATCGCTC CGGGCGAAGA GCTCACGATA ACGTACGTGG ACGCCGATTC TCCGCGCGAC GCCAGACGCG CGCGTCTCGC GAATTCCTAC GCCTTCGATT GCGCGTGTTC CCGCTGCGCG GCGGGCGAAC AGCGCGCCGC GAATAGTCTA GCCCACCCGT AG
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Protein sequence | MDNARSRCEW CLRASAGGAT CESCADARRL AYGDFEKTHG VDLSELEAYC EKNGGLKFPL ITARAASMIA SGALNKSTLE WLCAANDVET NPPAQWLEEC DVLRRAFGDA GKDIITPAWY AGITSRLHLN SFRVEIPVDA AASTTDFKDV LSAGLDAITQ GTASGSAVYK YVSLLNHSCA PNCHTHWENG DSSLTIRALR EIAPGEELTI TYVDADSPRD ARRARLANSY AFDCACSRCA AGEQRAANSL AHP
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