| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_1494 |
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| Symbol | |
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| ID | 5006397 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009372 |
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| Strand | + |
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| Start bp | 93305 |
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| End bp | 95020 |
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| Gene Length | 1716 bp |
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| Protein Length | 471 aa |
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| Translation table | |
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| GC content | 57% |
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| IMG OID | 640421818 |
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| Product | BCCT family transporter: carnitine/choline |
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| Protein accession | XP_001422299 |
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| Protein GI | 145356147 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.370102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0552905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTGCTCTGGG GCTTCATCAT CTGGGTGCTC GTCGACGAGA CGGGATCGTC AAGCGAAGTG
ACGCGTTGGA CGAAGTGGAT CACGAGTAAC TTTACGTGGC TGTACGTCGT CACGCAGGAT
GTCTGGTTTA TCTTCATCTT GTATCTTTTG GGTACAAAGT ACAAAGACGT GAAACTCGGT
CGCGACGACG AAGAACCCGC CTTTGACTAT TACGAATGGT TTTCCATGAT GTTTGCGTGC
GGTATCGGCG TTGGTCTGTA CACTTTCAGC GTCATGGAAC CCATCAGCTA CTACCGCGGC
GTCGTGTCAA AGCTTCCGAT CGTCAACGAC GATCAGCGCG CGCAGCAGGC GATCACGCTC
ACGCTCTTCC ACTGGGGCCT TCACGGTTGG ATTCCGTACG TCCTCGTCGC GATGACTTTG
GGCGTCGTGT GCTACCGTCA CGGACGTCCG ATGACTATCC GCTCCGCGTT TTATCCGCTC
TTCGGCGAAA ATATCAACGG TCTCTTCGGC GACGCGATCG ACGCGTTGTC CATCGCGACG
ACGACGTTCG GCGTGTGCAC GTCCCTCGGG CTCGGCGTCA CGACGATCGC GTCTACGATG
AACCGCTTGA ACAGCGATGT GGATCCAAAC GATGACGCCA CCAAGATCCT AATCATCTGG
TTGATCACTG CCGTCGCATG TACGTCGGTC ATTTTGGGTT TGAAGAACGG CATCAGAAGG
CTTTCCAAGA TTACGTTCTC CATCGGTCTC ATCTTGCTCT TTGGAATCAT CGTCGCGGAC
AACCCTTGGT TCTTACTCAA CTCTTTCGTG CAATCGATGG GTCATTACGT GCAATGGGTC
ACGCAGCTCG GCTGGGACAC GGACACGTGG CCCGCGTCCG AAGCCATCAT GCGCGACACG
GGCGCTTGGC ACTACCTCGC TTGGGGCGCC AAGGGTGAGA GCGATGCGAT CGCGCGGACG
CTTTCGACGC GTGGCGCCAC CGCCCTGACC GACACTGAGC TTAACACCAT GTGGGGCGTG
CGAACCGACG ACGGTTTCAT GAACACGTGG ACCCTCTTCT ATTGGGGGTG GTGGATTTCG
TGGGCCCCGT TCGTCGGCAT GTTCATCGCC AGGATCTCGC GTGGTAGAAC CGTCGGTGAA
GTCATCAAGG GTGCATTCAT CGCGCCTATT TTGTTTGGTT TCTTTTACCT CACCGTTTTG
GGCTCCCTCG GAATCAAAAT GGAGCGCATC GCCGAGCTCG CGTTGACGAC GGCGCCGGCG
GACGTCGACT GGCGAAGCGG CGACGTCAAG TGCACCACCC TCGGGTACGC CGCTGACGGG
ACGCCGACCA CCGCCGGATC GATTCAGCTC GCGAAAGAGG GCTACTACGC TCTGTCGTGC
CGTCCGACAT CGTCGCACAT CCTTGACATC GTTGAGCCTT ACGGCAAATT ATCGACGCTC
TTTCAAGCGA TGATTCTCAT CGCCATCATC CTGTACTTTA TCACGTCGTC GGATTCTGGA
TCGTACGTCG ACGACTTGAT CTCCGCCATG GGCTACGAAA ATCCGCCAGT GTTGCAAAAG
GTTTACTGGG CGTGCACCGA AGGCGCGCTC GCGCAAGCTT TGGTGACTTC CGGCGGCTTG
AAAGTGGTGC AAGGCGTCTC CATCGTCTGC GGTTTGCCGT TTACGTTTGC TCTCAACTTT
ATGGTCGTCT CTCTCTGGCG CGCGCTGAAG GATGAA
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| Protein sequence | LLWGFIIWVL VDETGSSSEV TRWTKWITSN FTWLYVVTQD VWFIFILYLL GTKYKDVKLG
RDDEEPAFDY YEWFSMMFAC GIGVGLYTFS VMEPISYYRG VVSKLPIVND DQRAQQAITL
TLFHWGLHGW IPYVLVAMTL GVVCYRHGRP MTIRSAFYPL FGENINGLFG DAIDALSIAT
TTFGVCTSLG LGVTTIASTM NRLNSDVDPN DDATKILIIW LITAVACTSV ILGLKNGIRR
LSKITFSIGL ILLFGIIVAD NPWFLLNSFV QSMGHYLNTM WGVRTDDGFM NTWTLFYWGW
WISWAPFVGM FIARISRGRT VGEVIKGAFI APILFGFFYL TVLGSLGIKM ERIAELALTT
APADVDWRSG DPYGKLSTLF QAMILIAIIL YFITSSDSGS YVDDLISAMG YENPPVLQKV
YWACTEGALA QALVTSGGLK VVQGVSIVCG LPFTFALNFM VVSLWRALKD E
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